Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 GOLGA2P11-201ENST00000562660 1621 ntBASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 IL9RP2-201ENST00000423948 1312 ntBASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 AC112907.3-201ENST00000577781 2400 ntBASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 AC092183.1-201ENST00000469884 875 ntBASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 AL121772.3-201ENST00000610840 674 ntBASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 BNIP3P18-201ENST00000593976 575 ntBASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 AC008556.1-201ENST00000610908 2040 ntBASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 FAAHP1-202ENST00000446499 1238 ntBASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 AL157384.1-201ENST00000445995 2473 ntBASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 MIR564-202ENST00000385049 94 ntBASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.72□□□□□ -0.37
VPS13DQ5THJ4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 LBX2-AS1-202ENST00000603175 2083 ntBASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 AC004870.1-201ENST00000315132 882 ntBASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 KRT18P23-201ENST00000435622 1283 ntBASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13DQ5THJ4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 AC125437.2-201ENST00000625180 2167 ntBASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13DQ5THJ4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms