Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGO1Q5FBB7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGO1Q5FBB7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SGO1Q5FBB7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGO1Q5FBB7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGO1Q5FBB7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGO1Q5FBB7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGO1Q5FBB7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 AL138781.2-201ENST00000617896 1843 ntBASIC18.4■□□□□ 0.54
SGO1Q5FBB7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 CD99P1-205ENST00000527459 561 ntBASIC18.4■□□□□ 0.54
SGO1Q5FBB7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 MIR4651-201ENST00000582622 73 ntBASIC18.4■□□□□ 0.54
SGO1Q5FBB7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 AC104581.1-202ENST00000635932 2618 ntBASIC18.4■□□□□ 0.54
SGO1Q5FBB7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
SGO1Q5FBB7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SGO1Q5FBB7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SGO1Q5FBB7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SGO1Q5FBB7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SGO1Q5FBB7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
SGO1Q5FBB7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
SGO1Q5FBB7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 KRT16P5-201ENST00000455284 522 ntBASIC18.39■□□□□ 0.53
SGO1Q5FBB7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 AC124016.1-201ENST00000609552 612 ntBASIC18.39■□□□□ 0.53
SGO1Q5FBB7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGO1Q5FBB7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.38■□□□□ 0.53
SGO1Q5FBB7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 RN7SL471P-201ENST00000580476 299 ntBASIC18.38■□□□□ 0.53
SGO1Q5FBB7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGO1Q5FBB7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms