Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.73■■□□□ 1.07
USH1GQ495M9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.73■■□□□ 1.07
USH1GQ495M9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.73■■□□□ 1.07
USH1GQ495M9 AL359075.1-203ENST00000462729 1002 ntBASIC21.73■■□□□ 1.07
USH1GQ495M9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.73■■□□□ 1.07
USH1GQ495M9 LINC01238-205ENST00000567549 1107 ntBASIC21.73■■□□□ 1.07
USH1GQ495M9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
USH1GQ495M9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.73■■□□□ 1.07
USH1GQ495M9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.73■■□□□ 1.07
USH1GQ495M9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.73■■□□□ 1.07
USH1GQ495M9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
USH1GQ495M9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.72■■□□□ 1.07
USH1GQ495M9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
USH1GQ495M9 KRT8P3-201ENST00000519669 1449 ntBASIC21.72■■□□□ 1.07
USH1GQ495M9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.72■■□□□ 1.07
USH1GQ495M9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.72■■□□□ 1.07
USH1GQ495M9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.72■■□□□ 1.07
USH1GQ495M9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.72■■□□□ 1.07
USH1GQ495M9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 FAM8A6P-201ENST00000407496 1135 ntBASIC21.72■■□□□ 1.07
USH1GQ495M9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.72■■□□□ 1.07
USH1GQ495M9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.72■■□□□ 1.07
USH1GQ495M9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
USH1GQ495M9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
USH1GQ495M9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.72■■□□□ 1.07
USH1GQ495M9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.72■■□□□ 1.07
USH1GQ495M9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.72■■□□□ 1.07
USH1GQ495M9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.72■■□□□ 1.07
USH1GQ495M9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USH1GQ495M9 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.71■■□□□ 1.07
USH1GQ495M9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.71■■□□□ 1.07
USH1GQ495M9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USH1GQ495M9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.71■■□□□ 1.07
USH1GQ495M9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
USH1GQ495M9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.71■■□□□ 1.07
USH1GQ495M9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USH1GQ495M9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.71■■□□□ 1.07
USH1GQ495M9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.71■■□□□ 1.07
USH1GQ495M9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.71■■□□□ 1.07
USH1GQ495M9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.71■■□□□ 1.07
USH1GQ495M9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
USH1GQ495M9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.71■■□□□ 1.07
USH1GQ495M9 AL031432.5-201ENST00000641059 760 ntBASIC21.71■■□□□ 1.07
USH1GQ495M9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.71■■□□□ 1.07
USH1GQ495M9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USH1GQ495M9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.71■■□□□ 1.07
USH1GQ495M9 FEM1AP3-201ENST00000403722 1741 ntBASIC21.71■■□□□ 1.07
USH1GQ495M9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USH1GQ495M9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USH1GQ495M9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
USH1GQ495M9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USH1GQ495M9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
USH1GQ495M9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.7■■□□□ 1.06
USH1GQ495M9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.7■■□□□ 1.06
USH1GQ495M9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 MCCD1P1-208ENST00000445732 328 ntBASIC21.7■■□□□ 1.06
USH1GQ495M9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.7■■□□□ 1.06
USH1GQ495M9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
USH1GQ495M9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
USH1GQ495M9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.7■■□□□ 1.06
USH1GQ495M9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USH1GQ495M9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
USH1GQ495M9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USH1GQ495M9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USH1GQ495M9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USH1GQ495M9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USH1GQ495M9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
USH1GQ495M9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USH1GQ495M9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.69■■□□□ 1.06
USH1GQ495M9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms