Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 AC120498.8-201ENST00000614275 531 ntBASIC14.48□□□□□ -0.09
HIST1H1AQ02539 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H1AQ02539 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AL355802.2-201ENST00000402069 882 ntBASIC14.47□□□□□ -0.09
HIST1H1AQ02539 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AC090192.1-201ENST00000517740 490 ntBASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AC008687.6-201ENST00000596318 630 ntBASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 AC104771.1-201ENST00000603335 964 ntBASIC14.47□□□□□ -0.09
HIST1H1AQ02539 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 KRT8P8-201ENST00000434750 1448 ntBASIC14.47□□□□□ -0.09
HIST1H1AQ02539 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST1H1AQ02539 CROCCP3-202ENST00000420820 1947 ntBASIC14.47□□□□□ -0.09
HIST1H1AQ02539 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms