Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GABREP78334 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.99■□□□□ 0.47
GABREP78334 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
GABREP78334 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GABREP78334 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.98■□□□□ 0.47
GABREP78334 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.98■□□□□ 0.47
GABREP78334 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
GABREP78334 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.98■□□□□ 0.47
GABREP78334 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.98■□□□□ 0.47
GABREP78334 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
GABREP78334 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GABREP78334 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.98■□□□□ 0.47
GABREP78334 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.98■□□□□ 0.47
GABREP78334 AL162741.1-201ENST00000565563 1558 ntBASIC17.98■□□□□ 0.47
GABREP78334 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.98■□□□□ 0.47
GABREP78334 AL691432.2-201ENST00000607222 2038 ntBASIC17.98■□□□□ 0.47
GABREP78334 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.98■□□□□ 0.47
GABREP78334 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GABREP78334 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GABREP78334 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
GABREP78334 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GABREP78334 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GABREP78334 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GABREP78334 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 CHCHD2P8-201ENST00000429873 447 ntBASIC17.97■□□□□ 0.47
GABREP78334 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.97■□□□□ 0.47
GABREP78334 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
GABREP78334 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.97■□□□□ 0.47
GABREP78334 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.97■□□□□ 0.47
GABREP78334 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GABREP78334 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GABREP78334 KRT18P1-202ENST00000452408 1331 ntBASIC17.97■□□□□ 0.47
GABREP78334 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.97■□□□□ 0.47
GABREP78334 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.97■□□□□ 0.47
GABREP78334 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.97■□□□□ 0.47
GABREP78334 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
GABREP78334 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABREP78334 AC093525.10-201ENST00000625130 1569 ntBASIC17.96■□□□□ 0.47
GABREP78334 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.96■□□□□ 0.47
GABREP78334 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABREP78334 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABREP78334 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
GABREP78334 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.96■□□□□ 0.47
GABREP78334 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.96■□□□□ 0.47
GABREP78334 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABREP78334 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.96■□□□□ 0.47
GABREP78334 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.96■□□□□ 0.47
GABREP78334 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
GABREP78334 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABREP78334 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABREP78334 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.96■□□□□ 0.47
GABREP78334 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
GABREP78334 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
GABREP78334 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
GABREP78334 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
GABREP78334 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.95■□□□□ 0.46
GABREP78334 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
GABREP78334 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GABREP78334 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.95■□□□□ 0.46
GABREP78334 AL732292.2-201ENST00000609649 430 ntBASIC17.95■□□□□ 0.46
GABREP78334 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms