Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR4P61073 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR4P61073 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CXCR4P61073 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCR4P61073 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CXCR4P61073 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.26■□□□□ 0.35
CXCR4P61073 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCR4P61073 LSM12P1-201ENST00000411836 588 ntBASIC17.26■□□□□ 0.35
CXCR4P61073 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CXCR4P61073 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCR4P61073 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCR4P61073 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR4P61073 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR4P61073 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CXCR4P61073 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 AC134043.2-201ENST00000624206 2238 ntBASIC17.25■□□□□ 0.35
CXCR4P61073 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCR4P61073 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR4P61073 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR4P61073 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR4P61073 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CXCR4P61073 GPX1P1-201ENST00000388829 606 ntBASIC17.25■□□□□ 0.35
CXCR4P61073 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCR4P61073 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CXCR4P61073 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR4P61073 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CXCR4P61073 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CXCR4P61073 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CXCR4P61073 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CXCR4P61073 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR4P61073 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CXCR4P61073 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCR4P61073 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCR4P61073 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCR4P61073 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CXCR4P61073 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCR4P61073 AC005181.1-201ENST00000604782 1256 ntBASIC17.24■□□□□ 0.35
CXCR4P61073 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CXCR4P61073 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCR4P61073 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR4P61073 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CXCR4P61073 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCR4P61073 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.23■□□□□ 0.35
CXCR4P61073 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms