Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC018470.1-201ENST00000624790 3129 ntBASIC18.53■□□□□ 0.56
CDH13P55290 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH13P55290 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH13P55290 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 TSPY21P-201ENST00000433481 731 ntBASIC18.53■□□□□ 0.56
CDH13P55290 AC026366.1-201ENST00000488803 879 ntBASIC18.53■□□□□ 0.56
CDH13P55290 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.53■□□□□ 0.56
CDH13P55290 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
CDH13P55290 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
CDH13P55290 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH13P55290 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH13P55290 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 ANO7L1-203ENST00000602586 1720 ntBASIC18.52■□□□□ 0.56
CDH13P55290 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH13P55290 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 ID1-201ENST00000376105 1233 ntBASIC18.52■□□□□ 0.56
CDH13P55290 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH13P55290 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH13P55290 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH13P55290 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH13P55290 AC083906.6-201ENST00000641366 219 ntBASIC18.52■□□□□ 0.56
CDH13P55290 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CDH13P55290 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CDH13P55290 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
CDH13P55290 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH13P55290 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH13P55290 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.52■□□□□ 0.55
CDH13P55290 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CDH13P55290 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH13P55290 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH13P55290 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH13P55290 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH13P55290 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDH13P55290 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH13P55290 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH13P55290 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH13P55290 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDH13P55290 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 KRT8P41-201ENST00000533985 1514 ntBASIC18.51■□□□□ 0.55
CDH13P55290 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH13P55290 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH13P55290 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH13P55290 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH13P55290 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH13P55290 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDH13P55290 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH13P55290 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH13P55290 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH13P55290 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH13P55290 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CDH13P55290 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CDH13P55290 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CDH13P55290 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH13P55290 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH13P55290 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms