Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH12P55289 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH12P55289 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH12P55289 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH12P55289 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDH12P55289 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDH12P55289 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CDH12P55289 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CDH12P55289 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 BICD1-207ENST00000551848 1962 ntBASIC17.64■□□□□ 0.41
CDH12P55289 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CDH12P55289 FEM1AP3-201ENST00000403722 1741 ntBASIC17.64■□□□□ 0.41
CDH12P55289 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDH12P55289 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.64■□□□□ 0.41
CDH12P55289 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDH12P55289 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH12P55289 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH12P55289 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDH12P55289 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH12P55289 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH12P55289 TUBB8P6-201ENST00000436895 1288 ntBASIC17.64■□□□□ 0.41
CDH12P55289 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH12P55289 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH12P55289 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH12P55289 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDH12P55289 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH12P55289 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDH12P55289 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDH12P55289 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDH12P55289 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CDH12P55289 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH12P55289 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH12P55289 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CDH12P55289 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH12P55289 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.63■□□□□ 0.41
CDH12P55289 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH12P55289 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 AL133373.2-201ENST00000623187 2828 ntBASIC17.63■□□□□ 0.41
CDH12P55289 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH12P55289 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH12P55289 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH12P55289 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH12P55289 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CDH12P55289 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH12P55289 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 ANO7L1-203ENST00000602586 1720 ntBASIC17.62■□□□□ 0.41
CDH12P55289 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH12P55289 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 POM121L13P-201ENST00000422362 380 ntBASIC17.62■□□□□ 0.41
CDH12P55289 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH12P55289 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH12P55289 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH12P55289 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH12P55289 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH12P55289 UNC93B5-201ENST00000530315 699 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms