Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KRT18P57-201ENST00000443599 1254 ntBASIC19.35■□□□□ 0.69
CDH4P55283 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CDH4P55283 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH4P55283 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH4P55283 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH4P55283 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH4P55283 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH4P55283 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH4P55283 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH4P55283 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CDH4P55283 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH4P55283 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH4P55283 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH4P55283 MCCD1P1-208ENST00000445732 328 ntBASIC19.34■□□□□ 0.69
CDH4P55283 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH4P55283 RN7SL850P-201ENST00000579959 291 ntBASIC19.34■□□□□ 0.69
CDH4P55283 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH4P55283 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH4P55283 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH4P55283 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH4P55283 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH4P55283 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CDH4P55283 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDH4P55283 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH4P55283 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDH4P55283 KRT8P32-201ENST00000512863 1461 ntBASIC19.34■□□□□ 0.69
CDH4P55283 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH4P55283 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH4P55283 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH4P55283 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CDH4P55283 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.33■□□□□ 0.69
CDH4P55283 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH4P55283 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.33■□□□□ 0.68
CDH4P55283 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 TMPOP1-202ENST00000424642 1267 ntBASIC19.33■□□□□ 0.68
CDH4P55283 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDH4P55283 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CDH4P55283 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH4P55283 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
CDH4P55283 CR769767.2-201ENST00000622735 460 ntBASIC19.33■□□□□ 0.68
CDH4P55283 RCC2P3-201ENST00000418112 1537 ntBASIC19.33■□□□□ 0.68
CDH4P55283 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDH4P55283 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH4P55283 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CDH4P55283 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH4P55283 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH4P55283 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CDH4P55283 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CDH4P55283 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH4P55283 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CDH4P55283 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH4P55283 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH4P55283 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CDH4P55283 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH4P55283 BX664615.1-201ENST00000443558 458 ntBASIC19.32■□□□□ 0.68
CDH4P55283 WWOX-216ENST00000569818 525 ntBASIC19.32■□□□□ 0.68
CDH4P55283 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH4P55283 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH4P55283 AC141257.4-201ENST00000634557 245 ntBASIC19.32■□□□□ 0.68
CDH4P55283 AC136944.6-201ENST00000634818 245 ntBASIC19.32■□□□□ 0.68
CDH4P55283 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 AL109659.2-201ENST00000606809 1674 ntBASIC19.32■□□□□ 0.68
CDH4P55283 AL049812.1-201ENST00000432563 2267 ntBASIC19.32■□□□□ 0.68
CDH4P55283 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDH4P55283 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH4P55283 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH4P55283 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH4P55283 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDH4P55283 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms