Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
CLTCL1P53675 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC27.12■■□□□ 1.93
CLTCL1P53675 PRELID1P1-202ENST00000567272 903 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 NAT14-202ENST00000587400 416 ntTSL 5 BASIC27.12■■□□□ 1.93
CLTCL1P53675 AP002414.4-201ENST00000589764 1148 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 AC011498.5-201ENST00000592027 486 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC27.12■■□□□ 1.93
CLTCL1P53675 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
CLTCL1P53675 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 IRX1P1-201ENST00000438849 1838 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 MIR662-201ENST00000384847 95 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 AC246785.2-201ENST00000432512 513 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC27.12■■□□□ 1.93
CLTCL1P53675 KRT8P26-201ENST00000534154 1276 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC27.12■■□□□ 1.93
CLTCL1P53675 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC27.12■■□□□ 1.93
CLTCL1P53675 IFNL4P1-201ENST00000607083 540 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC27.12■■□□□ 1.93
CLTCL1P53675 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC27.12■■□□□ 1.93
CLTCL1P53675 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
CLTCL1P53675 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLTCL1P53675 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLTCL1P53675 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CLTCL1P53675 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC27.11■■□□□ 1.93
CLTCL1P53675 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLTCL1P53675 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CLTCL1P53675 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
CLTCL1P53675 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC27.11■■□□□ 1.93
CLTCL1P53675 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLTCL1P53675 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
CLTCL1P53675 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLTCL1P53675 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC27.11■■□□□ 1.93
CLTCL1P53675 UBC-206ENST00000538617 1303 ntTSL 5 BASIC27.1■■□□□ 1.93
CLTCL1P53675 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CLTCL1P53675 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CLTCL1P53675 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC27.1■■□□□ 1.93
CLTCL1P53675 UBQLN4P1-201ENST00000461599 1801 ntBASIC27.1■■□□□ 1.93
CLTCL1P53675 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CLTCL1P53675 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC27.1■■□□□ 1.93
CLTCL1P53675 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CLTCL1P53675 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CLTCL1P53675 SDHD-206ENST00000528182 754 ntTSL 3 BASIC27.1■■□□□ 1.93
CLTCL1P53675 CIB2-208ENST00000560618 804 ntTSL 2 BASIC27.1■■□□□ 1.93
CLTCL1P53675 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CLTCL1P53675 LITAF-220ENST00000620789 692 ntTSL 5 BASIC27.1■■□□□ 1.93
CLTCL1P53675 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC27.1■■□□□ 1.93
CLTCL1P53675 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
CLTCL1P53675 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
CLTCL1P53675 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CLTCL1P53675 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CLTCL1P53675 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC27.1■■□□□ 1.93
CLTCL1P53675 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CLTCL1P53675 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CLTCL1P53675 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CLTCL1P53675 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
CLTCL1P53675 TPM4P1-201ENST00000436100 807 ntBASIC27.09■■□□□ 1.93
CLTCL1P53675 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC27.09■■□□□ 1.93
CLTCL1P53675 AC092329.2-201ENST00000598402 547 ntBASIC27.09■■□□□ 1.93
CLTCL1P53675 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CLTCL1P53675 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CLTCL1P53675 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC27.09■■□□□ 1.93
CLTCL1P53675 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CLTCL1P53675 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC27.09■■□□□ 1.93
CLTCL1P53675 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CLTCL1P53675 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC27.08■■□□□ 1.93
CLTCL1P53675 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC27.08■■□□□ 1.93
CLTCL1P53675 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC27.08■■□□□ 1.93
CLTCL1P53675 MIR3652-201ENST00000579335 131 ntBASIC27.08■■□□□ 1.93
CLTCL1P53675 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
CLTCL1P53675 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
CLTCL1P53675 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 KRT8P32-201ENST00000512863 1461 ntBASIC27.08■■□□□ 1.93
CLTCL1P53675 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC27.08■■□□□ 1.93
CLTCL1P53675 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC27.08■■□□□ 1.93
CLTCL1P53675 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CLTCL1P53675 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
CLTCL1P53675 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CLTCL1P53675 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CLTCL1P53675 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC27.07■■□□□ 1.92
CLTCL1P53675 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CLTCL1P53675 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CLTCL1P53675 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms