Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KRT6CP48668 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT6CP48668 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT6CP48668 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT6CP48668 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
KRT6CP48668 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 AC133681.1-201ENST00000465482 601 ntBASIC18.35■□□□□ 0.53
KRT6CP48668 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT6CP48668 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT6CP48668 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
KRT6CP48668 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT6CP48668 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.35■□□□□ 0.53
KRT6CP48668 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT6CP48668 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KRT6CP48668 AL512353.2-201ENST00000448759 1962 ntBASIC18.35■□□□□ 0.53
KRT6CP48668 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT6CP48668 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6CP48668 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
KRT6CP48668 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6CP48668 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KRT6CP48668 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT6CP48668 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6CP48668 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6CP48668 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6CP48668 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KRT6CP48668 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KRT6CP48668 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 AC124016.1-201ENST00000609552 612 ntBASIC18.34■□□□□ 0.53
KRT6CP48668 AC110285.5-201ENST00000611501 352 ntBASIC18.34■□□□□ 0.53
KRT6CP48668 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6CP48668 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6CP48668 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT6CP48668 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6CP48668 KRT8P41-201ENST00000533985 1514 ntBASIC18.33■□□□□ 0.53
KRT6CP48668 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6CP48668 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6CP48668 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
KRT6CP48668 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
KRT6CP48668 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6CP48668 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.33■□□□□ 0.53
KRT6CP48668 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6CP48668 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KRT6CP48668 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6CP48668 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT6CP48668 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT6CP48668 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT6CP48668 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT6CP48668 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
KRT6CP48668 RN7SL471P-201ENST00000580476 299 ntBASIC18.33■□□□□ 0.52
KRT6CP48668 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT6CP48668 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6CP48668 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6CP48668 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6CP48668 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6CP48668 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6CP48668 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
KRT6CP48668 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6CP48668 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
KRT6CP48668 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT6CP48668 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT6CP48668 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6CP48668 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms