Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.69■□□□□ 0.74
MMP13P45452 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MMP13P45452 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.69■□□□□ 0.74
MMP13P45452 AF186192.3-201ENST00000583427 947 ntBASIC19.69■□□□□ 0.74
MMP13P45452 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP13P45452 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MMP13P45452 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP13P45452 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 AC141586.3-201ENST00000562166 1838 ntBASIC19.69■□□□□ 0.74
MMP13P45452 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MMP13P45452 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.69■□□□□ 0.74
MMP13P45452 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP13P45452 NOC2LP2-201ENST00000407594 1944 ntBASIC19.68■□□□□ 0.74
MMP13P45452 AL135905.2-201ENST00000584934 1404 ntBASIC19.68■□□□□ 0.74
MMP13P45452 NOC2LP1-202ENST00000452600 2235 ntBASIC19.68■□□□□ 0.74
MMP13P45452 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 AC020916.1-201ENST00000587762 1774 ntBASIC19.68■□□□□ 0.74
MMP13P45452 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
MMP13P45452 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
MMP13P45452 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.68■□□□□ 0.74
MMP13P45452 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP13P45452 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
MMP13P45452 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
MMP13P45452 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 LTB4R2-202ENST00000528054 3092 ntBASIC19.68■□□□□ 0.74
MMP13P45452 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.68■□□□□ 0.74
MMP13P45452 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP13P45452 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP13P45452 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.67■□□□□ 0.74
MMP13P45452 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP13P45452 AC093525.10-201ENST00000625130 1569 ntBASIC19.67■□□□□ 0.74
MMP13P45452 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP13P45452 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.67■□□□□ 0.74
MMP13P45452 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP13P45452 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP13P45452 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP13P45452 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.67■□□□□ 0.74
MMP13P45452 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.67■□□□□ 0.74
MMP13P45452 AL445675.2-201ENST00000620291 557 ntBASIC19.67■□□□□ 0.74
MMP13P45452 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP13P45452 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.67■□□□□ 0.74
MMP13P45452 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP13P45452 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP13P45452 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MMP13P45452 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP13P45452 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.67■□□□□ 0.74
MMP13P45452 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
MMP13P45452 TEX21P-204ENST00000641479 1693 ntBASIC19.66■□□□□ 0.74
MMP13P45452 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP13P45452 AP000997.3-201ENST00000623333 2250 ntBASIC19.66■□□□□ 0.74
MMP13P45452 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 KSR1P1-201ENST00000446298 240 ntBASIC19.66■□□□□ 0.74
MMP13P45452 RPS2P4-201ENST00000476944 856 ntBASIC19.66■□□□□ 0.74
MMP13P45452 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.66■□□□□ 0.74
MMP13P45452 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.66■□□□□ 0.74
MMP13P45452 AL160286.2-201ENST00000567150 934 ntBASIC19.66■□□□□ 0.74
MMP13P45452 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP13P45452 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP13P45452 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.66■□□□□ 0.74
MMP13P45452 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.66■□□□□ 0.74
MMP13P45452 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.66■□□□□ 0.74
MMP13P45452 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.66■□□□□ 0.74
MMP13P45452 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP13P45452 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MMP13P45452 SDHAP1-207ENST00000440850 2000 ntBASIC19.66■□□□□ 0.74
MMP13P45452 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP13P45452 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
MMP13P45452 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MMP13P45452 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP13P45452 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms