Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A3P43003 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A3P43003 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A3P43003 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A3P43003 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SLC1A3P43003 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A3P43003 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A3P43003 Z85996.1-201ENST00000494644 937 ntBASIC17.41■□□□□ 0.38
SLC1A3P43003 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC1A3P43003 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC1A3P43003 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A3P43003 AC142381.4-202ENST00000563973 229 ntBASIC17.41■□□□□ 0.38
SLC1A3P43003 AF186192.3-201ENST00000583427 947 ntBASIC17.41■□□□□ 0.38
SLC1A3P43003 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A3P43003 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A3P43003 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC1A3P43003 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC1A3P43003 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A3P43003 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A3P43003 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A3P43003 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC1A3P43003 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A3P43003 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A3P43003 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A3P43003 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.4■□□□□ 0.38
SLC1A3P43003 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 AL135905.2-201ENST00000584934 1404 ntBASIC17.4■□□□□ 0.38
SLC1A3P43003 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A3P43003 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A3P43003 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 AC004980.1-204ENST00000429707 299 ntBASIC17.4■□□□□ 0.38
SLC1A3P43003 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.4■□□□□ 0.38
SLC1A3P43003 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A3P43003 RPS2P4-201ENST00000476944 856 ntBASIC17.4■□□□□ 0.38
SLC1A3P43003 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A3P43003 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A3P43003 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A3P43003 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A3P43003 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A3P43003 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A3P43003 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC1A3P43003 KRT16P1-201ENST00000399124 1418 ntBASIC17.39■□□□□ 0.38
SLC1A3P43003 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC1A3P43003 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 GCSHP5-201ENST00000443090 522 ntBASIC17.39■□□□□ 0.37
SLC1A3P43003 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 AC098590.1-201ENST00000468126 897 ntBASIC17.39■□□□□ 0.37
SLC1A3P43003 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.39■□□□□ 0.37
SLC1A3P43003 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC1A3P43003 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC1A3P43003 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC1A3P43003 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 AC073195.1-201ENST00000607241 877 ntBASIC17.39■□□□□ 0.37
SLC1A3P43003 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms