Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
GDNFP39905 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
GDNFP39905 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
GDNFP39905 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
GDNFP39905 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.48■□□□□ 0.23
GDNFP39905 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GDNFP39905 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.48■□□□□ 0.23
GDNFP39905 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.48■□□□□ 0.23
GDNFP39905 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.48■□□□□ 0.23
GDNFP39905 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.48■□□□□ 0.23
GDNFP39905 AC092118.2-201ENST00000613495 667 ntBASIC16.48■□□□□ 0.23
GDNFP39905 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
GDNFP39905 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
GDNFP39905 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDNFP39905 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GDNFP39905 AC012313.1-201ENST00000593393 3059 ntBASIC16.47■□□□□ 0.23
GDNFP39905 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.47■□□□□ 0.23
GDNFP39905 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.47■□□□□ 0.23
GDNFP39905 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.47■□□□□ 0.23
GDNFP39905 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GDNFP39905 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GDNFP39905 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GDNFP39905 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
GDNFP39905 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.47■□□□□ 0.23
GDNFP39905 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.47■□□□□ 0.23
GDNFP39905 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.47■□□□□ 0.23
GDNFP39905 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.47■□□□□ 0.23
GDNFP39905 AC091874.3-201ENST00000512672 1195 ntBASIC16.47■□□□□ 0.23
GDNFP39905 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.47■□□□□ 0.23
GDNFP39905 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.47■□□□□ 0.23
GDNFP39905 AC139713.2-201ENST00000641328 2723 ntBASIC16.47■□□□□ 0.23
GDNFP39905 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GDNFP39905 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GDNFP39905 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 ZNF815P-204ENST00000434898 1737 ntBASIC16.47■□□□□ 0.23
GDNFP39905 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GDNFP39905 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDNFP39905 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.47■□□□□ 0.23
GDNFP39905 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GDNFP39905 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.46■□□□□ 0.23
GDNFP39905 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GDNFP39905 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GDNFP39905 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GDNFP39905 HLA-L-209ENST00000420110 1011 ntBASIC16.46■□□□□ 0.23
GDNFP39905 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GDNFP39905 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.46■□□□□ 0.23
GDNFP39905 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.46■□□□□ 0.23
GDNFP39905 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.46■□□□□ 0.23
GDNFP39905 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.46■□□□□ 0.23
GDNFP39905 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms