Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.14■□□□□ 0.17
CDKN1AP38936 NEK4P2-201ENST00000580004 1012 ntBASIC16.14■□□□□ 0.17
CDKN1AP38936 AL121894.2-201ENST00000602977 491 ntBASIC16.14■□□□□ 0.17
CDKN1AP38936 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKN1AP38936 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKN1AP38936 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.14■□□□□ 0.17
CDKN1AP38936 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.14■□□□□ 0.17
CDKN1AP38936 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN1AP38936 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CDKN1AP38936 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
CDKN1AP38936 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN1AP38936 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN1AP38936 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN1AP38936 KRT18P48-201ENST00000434763 852 ntBASIC16.13■□□□□ 0.17
CDKN1AP38936 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKN1AP38936 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN1AP38936 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN1AP38936 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKN1AP38936 AC083849.1-201ENST00000615227 514 ntBASIC16.13■□□□□ 0.17
CDKN1AP38936 AC116407.4-201ENST00000623319 1061 ntBASIC16.13■□□□□ 0.17
CDKN1AP38936 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 TCF3P1-201ENST00000423021 1937 ntBASIC16.13■□□□□ 0.17
CDKN1AP38936 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN1AP38936 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN1AP38936 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CDKN1AP38936 SDHAP1-207ENST00000440850 2000 ntBASIC16.12■□□□□ 0.17
CDKN1AP38936 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN1AP38936 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
CDKN1AP38936 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 LINC01311-201ENST00000565162 1445 ntBASIC16.12■□□□□ 0.17
CDKN1AP38936 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDKN1AP38936 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN1AP38936 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKN1AP38936 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKN1AP38936 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN1AP38936 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 SPDYE15P-201ENST00000424157 909 ntBASIC16.12■□□□□ 0.17
CDKN1AP38936 HCG4P8-203ENST00000443049 980 ntBASIC16.12■□□□□ 0.17
CDKN1AP38936 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN1AP38936 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CDKN1AP38936 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKN1AP38936 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.12■□□□□ 0.17
CDKN1AP38936 CR769767.2-201ENST00000622735 460 ntBASIC16.12■□□□□ 0.17
CDKN1AP38936 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN1AP38936 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CDKN1AP38936 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN1AP38936 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.11■□□□□ 0.17
CDKN1AP38936 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKN1AP38936 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDKN1AP38936 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKN1AP38936 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDKN1AP38936 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN1AP38936 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms