Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.8■■□□□ 1.4
RFC4P35249 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.8■■□□□ 1.4
RFC4P35249 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFC4P35249 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFC4P35249 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFC4P35249 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFC4P35249 KRT18P23-201ENST00000435622 1283 ntBASIC23.79■■□□□ 1.4
RFC4P35249 KRT16P4-201ENST00000453883 522 ntBASIC23.79■■□□□ 1.4
RFC4P35249 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.79■■□□□ 1.4
RFC4P35249 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.79■■□□□ 1.4
RFC4P35249 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.79■■□□□ 1.4
RFC4P35249 AL353801.3-201ENST00000609898 542 ntBASIC23.79■■□□□ 1.4
RFC4P35249 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
RFC4P35249 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RFC4P35249 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFC4P35249 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RFC4P35249 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFC4P35249 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFC4P35249 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.79■■□□□ 1.4
RFC4P35249 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFC4P35249 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RFC4P35249 LINC00167-201ENST00000530583 1419 ntBASIC23.78■■□□□ 1.4
RFC4P35249 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.78■■□□□ 1.4
RFC4P35249 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFC4P35249 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFC4P35249 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFC4P35249 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RFC4P35249 AP003733.1-201ENST00000491725 852 ntBASIC23.78■■□□□ 1.4
RFC4P35249 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.78■■□□□ 1.4
RFC4P35249 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.78■■□□□ 1.4
RFC4P35249 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFC4P35249 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
RFC4P35249 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.77■■□□□ 1.4
RFC4P35249 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFC4P35249 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.77■■□□□ 1.4
RFC4P35249 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.77■■□□□ 1.4
RFC4P35249 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.77■■□□□ 1.4
RFC4P35249 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.77■■□□□ 1.4
RFC4P35249 AC099336.1-202ENST00000602961 463 ntBASIC23.77■■□□□ 1.4
RFC4P35249 AC010240.3-201ENST00000607688 395 ntBASIC23.77■■□□□ 1.4
RFC4P35249 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFC4P35249 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RFC4P35249 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RFC4P35249 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RFC4P35249 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFC4P35249 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RFC4P35249 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFC4P35249 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RFC4P35249 AC233702.3-201ENST00000578656 1387 ntBASIC23.77■■□□□ 1.4
RFC4P35249 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFC4P35249 KRT8P7-201ENST00000533003 1432 ntBASIC23.76■■□□□ 1.39
RFC4P35249 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.76■■□□□ 1.39
RFC4P35249 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.76■■□□□ 1.39
RFC4P35249 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RFC4P35249 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFC4P35249 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFC4P35249 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.76■■□□□ 1.39
RFC4P35249 AC104390.1-201ENST00000555663 520 ntBASIC23.76■■□□□ 1.39
RFC4P35249 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.76■■□□□ 1.39
RFC4P35249 AL390719.2-201ENST00000606993 987 ntBASIC23.76■■□□□ 1.39
RFC4P35249 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.76■■□□□ 1.39
RFC4P35249 HLA-A-201ENST00000376802 1334 ntBASIC23.76■■□□□ 1.39
RFC4P35249 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFC4P35249 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RFC4P35249 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFC4P35249 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFC4P35249 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.76■■□□□ 1.39
RFC4P35249 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
RFC4P35249 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.75■■□□□ 1.39
RFC4P35249 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.75■■□□□ 1.39
RFC4P35249 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.75■■□□□ 1.39
RFC4P35249 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.75■■□□□ 1.39
RFC4P35249 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.75■■□□□ 1.39
RFC4P35249 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.75■■□□□ 1.39
RFC4P35249 Z69720.1-201ENST00000601483 472 ntBASIC23.75■■□□□ 1.39
RFC4P35249 AC120114.3-201ENST00000611923 658 ntBASIC23.75■■□□□ 1.39
RFC4P35249 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.75■■□□□ 1.39
RFC4P35249 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
RFC4P35249 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.75■■□□□ 1.39
RFC4P35249 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFC4P35249 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RFC4P35249 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms