Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 TSPY20P-201ENST00000450910 630 ntBASIC19.14■□□□□ 0.65
RPA3P35244 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.14■□□□□ 0.65
RPA3P35244 AC006058.3-201ENST00000606217 1069 ntBASIC19.14■□□□□ 0.65
RPA3P35244 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.14■□□□□ 0.65
RPA3P35244 AP000997.3-201ENST00000623333 2250 ntBASIC19.14■□□□□ 0.65
RPA3P35244 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.14■□□□□ 0.65
RPA3P35244 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.14■□□□□ 0.65
RPA3P35244 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RPA3P35244 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RPA3P35244 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA3P35244 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.13■□□□□ 0.65
RPA3P35244 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
RPA3P35244 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.13■□□□□ 0.65
RPA3P35244 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.13■□□□□ 0.65
RPA3P35244 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RPA3P35244 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.13■□□□□ 0.65
RPA3P35244 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.13■□□□□ 0.65
RPA3P35244 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.13■□□□□ 0.65
RPA3P35244 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.13■□□□□ 0.65
RPA3P35244 ANO7L1-203ENST00000602586 1720 ntBASIC19.13■□□□□ 0.65
RPA3P35244 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.13■□□□□ 0.65
RPA3P35244 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPA3P35244 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.13■□□□□ 0.65
RPA3P35244 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.12■□□□□ 0.65
RPA3P35244 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPA3P35244 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.12■□□□□ 0.65
RPA3P35244 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPA3P35244 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPA3P35244 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.12■□□□□ 0.65
RPA3P35244 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.12■□□□□ 0.65
RPA3P35244 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.12■□□□□ 0.65
RPA3P35244 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPA3P35244 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.12■□□□□ 0.65
RPA3P35244 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPA3P35244 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPA3P35244 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.12■□□□□ 0.65
RPA3P35244 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.12■□□□□ 0.65
RPA3P35244 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.12■□□□□ 0.65
RPA3P35244 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RPA3P35244 FZD10-202ENST00000539839 3282 ntBASIC19.12■□□□□ 0.65
RPA3P35244 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.12■□□□□ 0.65
RPA3P35244 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPA3P35244 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPA3P35244 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPA3P35244 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RPA3P35244 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RPA3P35244 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
RPA3P35244 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.11■□□□□ 0.65
RPA3P35244 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPA3P35244 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.11■□□□□ 0.65
RPA3P35244 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.11■□□□□ 0.65
RPA3P35244 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.11■□□□□ 0.65
RPA3P35244 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.11■□□□□ 0.65
RPA3P35244 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPA3P35244 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.11■□□□□ 0.65
RPA3P35244 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.11■□□□□ 0.65
RPA3P35244 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 AC069544.1-201ENST00000609399 999 ntBASIC19.11■□□□□ 0.65
RPA3P35244 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 AL121829.2-201ENST00000620908 328 ntBASIC19.11■□□□□ 0.65
RPA3P35244 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RPA3P35244 FEM1AP3-201ENST00000403722 1741 ntBASIC19.11■□□□□ 0.65
RPA3P35244 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPA3P35244 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPA3P35244 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms