Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CKS2P33552 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CKS2P33552 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.94□□□□□ -0.18
CKS2P33552 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 MFSD11-216ENST00000590393 1141 ntBASIC13.94□□□□□ -0.18
CKS2P33552 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.94□□□□□ -0.18
CKS2P33552 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CKS2P33552 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CKS2P33552 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CKS2P33552 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CKS2P33552 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.93□□□□□ -0.18
CKS2P33552 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.93□□□□□ -0.18
CKS2P33552 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.93□□□□□ -0.18
CKS2P33552 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.93□□□□□ -0.18
CKS2P33552 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.93□□□□□ -0.18
CKS2P33552 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.93□□□□□ -0.18
CKS2P33552 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CKS2P33552 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CKS2P33552 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CKS2P33552 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CKS2P33552 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
CKS2P33552 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.93□□□□□ -0.18
CKS2P33552 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.93□□□□□ -0.18
CKS2P33552 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS2P33552 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CKS2P33552 AC018553.1-201ENST00000616682 1458 ntBASIC13.93□□□□□ -0.18
CKS2P33552 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CKS2P33552 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.92□□□□□ -0.18
CKS2P33552 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CKS2P33552 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.92□□□□□ -0.18
CKS2P33552 PRORSD1P-202ENST00000563365 2154 ntBASIC13.92□□□□□ -0.18
CKS2P33552 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.92□□□□□ -0.18
CKS2P33552 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.92□□□□□ -0.18
CKS2P33552 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.92□□□□□ -0.18
CKS2P33552 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.92□□□□□ -0.18
CKS2P33552 AC106739.1-201ENST00000617035 715 ntBASIC13.92□□□□□ -0.18
CKS2P33552 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CKS2P33552 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.92□□□□□ -0.18
CKS2P33552 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CKS2P33552 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CKS2P33552 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CKS2P33552 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.91□□□□□ -0.18
CKS2P33552 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.91□□□□□ -0.18
CKS2P33552 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms