Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APEX1P27695 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APEX1P27695 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APEX1P27695 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
APEX1P27695 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APEX1P27695 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
APEX1P27695 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
APEX1P27695 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APEX1P27695 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
APEX1P27695 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APEX1P27695 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
APEX1P27695 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APEX1P27695 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APEX1P27695 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APEX1P27695 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.08■□□□□ 0.33
APEX1P27695 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.08■□□□□ 0.32
APEX1P27695 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.08■□□□□ 0.32
APEX1P27695 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
APEX1P27695 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.08■□□□□ 0.32
APEX1P27695 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.08■□□□□ 0.32
APEX1P27695 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.08■□□□□ 0.32
APEX1P27695 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.08■□□□□ 0.32
APEX1P27695 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
APEX1P27695 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
APEX1P27695 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.08■□□□□ 0.32
APEX1P27695 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
APEX1P27695 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.08■□□□□ 0.32
APEX1P27695 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.08■□□□□ 0.32
APEX1P27695 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.08■□□□□ 0.32
APEX1P27695 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.08■□□□□ 0.32
APEX1P27695 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APEX1P27695 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
APEX1P27695 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
APEX1P27695 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.07■□□□□ 0.32
APEX1P27695 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.07■□□□□ 0.32
APEX1P27695 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.07■□□□□ 0.32
APEX1P27695 RPS2P4-201ENST00000476944 856 ntBASIC17.07■□□□□ 0.32
APEX1P27695 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
APEX1P27695 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.07■□□□□ 0.32
APEX1P27695 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.07■□□□□ 0.32
APEX1P27695 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.07■□□□□ 0.32
APEX1P27695 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APEX1P27695 FAM197Y4-202ENST00000622692 608 ntBASIC17.07■□□□□ 0.32
APEX1P27695 AL023875.1-201ENST00000640777 796 ntBASIC17.07■□□□□ 0.32
APEX1P27695 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 BICD1-207ENST00000551848 1962 ntBASIC17.07■□□□□ 0.32
APEX1P27695 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APEX1P27695 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APEX1P27695 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.06■□□□□ 0.32
APEX1P27695 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.06■□□□□ 0.32
APEX1P27695 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
APEX1P27695 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
APEX1P27695 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 AL354751.1-201ENST00000412768 1863 ntBASIC17.06■□□□□ 0.32
APEX1P27695 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
APEX1P27695 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
APEX1P27695 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.06■□□□□ 0.32
APEX1P27695 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
APEX1P27695 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.06■□□□□ 0.32
APEX1P27695 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.06■□□□□ 0.32
APEX1P27695 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.06■□□□□ 0.32
APEX1P27695 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
APEX1P27695 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APEX1P27695 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms