Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC007663.1-201ENST00000438948 1240 ntBASIC19.1■□□□□ 0.65
XPAP23025 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.1■□□□□ 0.65
XPAP23025 AL353719.1-201ENST00000566847 864 ntBASIC19.1■□□□□ 0.65
XPAP23025 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.1■□□□□ 0.65
XPAP23025 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.1■□□□□ 0.65
XPAP23025 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.1■□□□□ 0.65
XPAP23025 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.1■□□□□ 0.65
XPAP23025 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
XPAP23025 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.1■□□□□ 0.65
XPAP23025 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
XPAP23025 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XPAP23025 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
XPAP23025 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XPAP23025 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.09■□□□□ 0.65
XPAP23025 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XPAP23025 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
XPAP23025 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
XPAP23025 INGX-201ENST00000359239 846 ntBASIC19.09■□□□□ 0.65
XPAP23025 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XPAP23025 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.09■□□□□ 0.65
XPAP23025 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
XPAP23025 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
XPAP23025 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
XPAP23025 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XPAP23025 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XPAP23025 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XPAP23025 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.09■□□□□ 0.65
XPAP23025 AC092338.2-201ENST00000568827 1415 ntBASIC19.08■□□□□ 0.65
XPAP23025 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
XPAP23025 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.08■□□□□ 0.65
XPAP23025 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.08■□□□□ 0.65
XPAP23025 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
XPAP23025 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
XPAP23025 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 TMPOP1-202ENST00000424642 1267 ntBASIC19.08■□□□□ 0.64
XPAP23025 KRT18P57-201ENST00000443599 1254 ntBASIC19.08■□□□□ 0.64
XPAP23025 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.08■□□□□ 0.64
XPAP23025 FAM87A-204ENST00000613235 858 ntBASIC19.08■□□□□ 0.64
XPAP23025 AL023803.3-201ENST00000615559 522 ntBASIC19.08■□□□□ 0.64
XPAP23025 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
XPAP23025 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
XPAP23025 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
XPAP23025 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
XPAP23025 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.08■□□□□ 0.64
XPAP23025 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
XPAP23025 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
XPAP23025 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 TERF1P1-201ENST00000311003 1181 ntBASIC19.07■□□□□ 0.64
XPAP23025 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.07■□□□□ 0.64
XPAP23025 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
XPAP23025 RCN1P1-201ENST00000400413 996 ntBASIC19.07■□□□□ 0.64
XPAP23025 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.07■□□□□ 0.64
XPAP23025 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.07■□□□□ 0.64
XPAP23025 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.07■□□□□ 0.64
XPAP23025 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
XPAP23025 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
XPAP23025 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
XPAP23025 AL512604.3-201ENST00000569583 964 ntBASIC19.07■□□□□ 0.64
XPAP23025 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
XPAP23025 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
XPAP23025 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 AC092865.7-201ENST00000641832 219 ntBASIC19.07■□□□□ 0.64
XPAP23025 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.07■□□□□ 0.64
XPAP23025 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.07■□□□□ 0.64
XPAP23025 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
XPAP23025 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XPAP23025 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms