Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.26■□□□□ 0.67
NFKB1P19838 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NFKB1P19838 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NFKB1P19838 AC093525.10-201ENST00000625130 1569 ntBASIC19.26■□□□□ 0.67
NFKB1P19838 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NFKB1P19838 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NFKB1P19838 AL031598.1-201ENST00000561511 1773 ntBASIC19.26■□□□□ 0.67
NFKB1P19838 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.26■□□□□ 0.67
NFKB1P19838 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NFKB1P19838 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NFKB1P19838 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NFKB1P19838 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
NFKB1P19838 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
NFKB1P19838 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
NFKB1P19838 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
NFKB1P19838 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 AC116562.2-201ENST00000507042 360 ntBASIC19.25■□□□□ 0.67
NFKB1P19838 AC008550.1-201ENST00000511500 884 ntBASIC19.25■□□□□ 0.67
NFKB1P19838 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.25■□□□□ 0.67
NFKB1P19838 AP000692.2-201ENST00000608391 879 ntBASIC19.25■□□□□ 0.67
NFKB1P19838 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.25■□□□□ 0.67
NFKB1P19838 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.25■□□□□ 0.67
NFKB1P19838 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFKB1P19838 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NFKB1P19838 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
NFKB1P19838 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.24■□□□□ 0.67
NFKB1P19838 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.24■□□□□ 0.67
NFKB1P19838 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.24■□□□□ 0.67
NFKB1P19838 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
NFKB1P19838 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 AL138781.2-201ENST00000617896 1843 ntBASIC19.24■□□□□ 0.67
NFKB1P19838 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.24■□□□□ 0.67
NFKB1P19838 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NFKB1P19838 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.24■□□□□ 0.67
NFKB1P19838 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.24■□□□□ 0.67
NFKB1P19838 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
NFKB1P19838 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
NFKB1P19838 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
NFKB1P19838 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NFKB1P19838 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NFKB1P19838 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFKB1P19838 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NFKB1P19838 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NFKB1P19838 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NFKB1P19838 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.23■□□□□ 0.67
NFKB1P19838 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.23■□□□□ 0.67
NFKB1P19838 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.23■□□□□ 0.67
NFKB1P19838 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.23■□□□□ 0.67
NFKB1P19838 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.23■□□□□ 0.67
NFKB1P19838 AC026471.5-201ENST00000615068 467 ntBASIC19.23■□□□□ 0.67
NFKB1P19838 REXO1L10P-201ENST00000615707 1290 ntBASIC19.23■□□□□ 0.67
NFKB1P19838 REXO1L12P-201ENST00000622156 912 ntBASIC19.23■□□□□ 0.67
NFKB1P19838 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NFKB1P19838 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NFKB1P19838 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.23■□□□□ 0.67
NFKB1P19838 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms