Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 CROCCP3-202ENST00000420820 1947 ntBASIC19.49■□□□□ 0.71
ERCC2P18074 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.49■□□□□ 0.71
ERCC2P18074 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.49■□□□□ 0.71
ERCC2P18074 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.49■□□□□ 0.71
ERCC2P18074 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ERCC2P18074 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 AP005242.2-201ENST00000580065 1175 ntBASIC19.49■□□□□ 0.71
ERCC2P18074 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.49■□□□□ 0.71
ERCC2P18074 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.49■□□□□ 0.71
ERCC2P18074 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 AP000525.1-201ENST00000608286 694 ntBASIC19.49■□□□□ 0.71
ERCC2P18074 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.49■□□□□ 0.71
ERCC2P18074 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC2P18074 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ERCC2P18074 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ERCC2P18074 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ERCC2P18074 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ERCC2P18074 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC2P18074 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC2P18074 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.48■□□□□ 0.71
ERCC2P18074 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.48■□□□□ 0.71
ERCC2P18074 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
ERCC2P18074 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC2P18074 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ERCC2P18074 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC2P18074 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ERCC2P18074 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC2P18074 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ERCC2P18074 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ERCC2P18074 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.47■□□□□ 0.71
ERCC2P18074 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.47■□□□□ 0.71
ERCC2P18074 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.47■□□□□ 0.71
ERCC2P18074 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 AC083906.6-201ENST00000641366 219 ntBASIC19.47■□□□□ 0.71
ERCC2P18074 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC2P18074 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ERCC2P18074 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.46■□□□□ 0.71
ERCC2P18074 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ERCC2P18074 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
ERCC2P18074 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ERCC2P18074 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.46■□□□□ 0.71
ERCC2P18074 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.46■□□□□ 0.71
ERCC2P18074 AL390955.1-201ENST00000428694 934 ntBASIC19.46■□□□□ 0.71
ERCC2P18074 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 FITM1-202ENST00000559294 800 ntBASIC19.46■□□□□ 0.71
ERCC2P18074 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.46■□□□□ 0.71
ERCC2P18074 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.46■□□□□ 0.71
ERCC2P18074 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.46■□□□□ 0.71
ERCC2P18074 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERCC2P18074 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms