Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.1■□□□□ 0.81
CHRNB2P17787 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHRNB2P17787 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.1■□□□□ 0.81
CHRNB2P17787 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CHRNB2P17787 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.09■□□□□ 0.81
CHRNB2P17787 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 RPS2P55-201ENST00000397318 883 ntBASIC20.09■□□□□ 0.81
CHRNB2P17787 FAM207BP-201ENST00000447172 505 ntBASIC20.09■□□□□ 0.81
CHRNB2P17787 AC107956.1-201ENST00000494359 873 ntBASIC20.09■□□□□ 0.81
CHRNB2P17787 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHRNB2P17787 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.09■□□□□ 0.81
CHRNB2P17787 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CHRNB2P17787 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
CHRNB2P17787 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.09■□□□□ 0.81
CHRNB2P17787 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRNB2P17787 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHRNB2P17787 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.08■□□□□ 0.81
CHRNB2P17787 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.08■□□□□ 0.81
CHRNB2P17787 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHRNB2P17787 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.08■□□□□ 0.81
CHRNB2P17787 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.08■□□□□ 0.81
CHRNB2P17787 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHRNB2P17787 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHRNB2P17787 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.08■□□□□ 0.81
CHRNB2P17787 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHRNB2P17787 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.08■□□□□ 0.81
CHRNB2P17787 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.08■□□□□ 0.81
CHRNB2P17787 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CHRNB2P17787 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHRNB2P17787 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.08■□□□□ 0.81
CHRNB2P17787 UBE2SP1-201ENST00000450587 669 ntBASIC20.08■□□□□ 0.81
CHRNB2P17787 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.08■□□□□ 0.81
CHRNB2P17787 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.08■□□□□ 0.81
CHRNB2P17787 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.08■□□□□ 0.81
CHRNB2P17787 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.08■□□□□ 0.81
CHRNB2P17787 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.08■□□□□ 0.81
CHRNB2P17787 AP000692.2-201ENST00000608391 879 ntBASIC20.08■□□□□ 0.81
CHRNB2P17787 AC113410.3-201ENST00000623366 203 ntBASIC20.08■□□□□ 0.81
CHRNB2P17787 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.08■□□□□ 0.81
CHRNB2P17787 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHRNB2P17787 AL135905.2-201ENST00000584934 1404 ntBASIC20.08■□□□□ 0.8
CHRNB2P17787 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
CHRNB2P17787 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHRNB2P17787 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CHRNB2P17787 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.08■□□□□ 0.8
CHRNB2P17787 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNB2P17787 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHRNB2P17787 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNB2P17787 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNB2P17787 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNB2P17787 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CHRNB2P17787 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.07■□□□□ 0.8
CHRNB2P17787 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 AC116562.2-201ENST00000507042 360 ntBASIC20.07■□□□□ 0.8
CHRNB2P17787 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.07■□□□□ 0.8
CHRNB2P17787 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNB2P17787 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNB2P17787 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNB2P17787 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNB2P17787 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRNB2P17787 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 FSCN1P1-201ENST00000568912 1481 ntBASIC20.06■□□□□ 0.8
CHRNB2P17787 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.06■□□□□ 0.8
CHRNB2P17787 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNB2P17787 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHRNB2P17787 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CHRNB2P17787 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNB2P17787 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 AC233702.5-201ENST00000584107 538 ntBASIC20.06■□□□□ 0.8
CHRNB2P17787 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 Z99916.2-201ENST00000604037 246 ntBASIC20.06■□□□□ 0.8
CHRNB2P17787 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNB2P17787 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNB2P17787 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNB2P17787 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNB2P17787 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNB2P17787 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms