Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC130P13994 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC130P13994 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC130P13994 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC130P13994 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC130P13994 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC130P13994 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC130P13994 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC130P13994 RCN1P1-201ENST00000400413 996 ntBASIC20.04■□□□□ 0.8
CCDC130P13994 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC130P13994 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 KRT18P57-201ENST00000443599 1254 ntBASIC20.04■□□□□ 0.8
CCDC130P13994 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC130P13994 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC130P13994 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
CCDC130P13994 AC010653.2-201ENST00000623505 997 ntBASIC20.04■□□□□ 0.8
CCDC130P13994 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC130P13994 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC130P13994 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC130P13994 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC130P13994 AIRN-201ENST00000601203 4374 ntBASIC20.04■□□□□ 0.8
CCDC130P13994 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC130P13994 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC130P13994 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC130P13994 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 KRT8P3-201ENST00000519669 1449 ntBASIC20.03■□□□□ 0.8
CCDC130P13994 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC130P13994 TERF1P1-201ENST00000311003 1181 ntBASIC20.03■□□□□ 0.8
CCDC130P13994 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC130P13994 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC130P13994 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC130P13994 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC130P13994 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC130P13994 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC130P13994 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC130P13994 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.03■□□□□ 0.8
CCDC130P13994 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 GPAT2P1-201ENST00000444924 1672 ntBASIC20.03■□□□□ 0.8
CCDC130P13994 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC130P13994 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC130P13994 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC130P13994 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC130P13994 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC130P13994 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC130P13994 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 HMGA1P5-201ENST00000412453 271 ntBASIC20.02■□□□□ 0.8
CCDC130P13994 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC130P13994 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC130P13994 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC130P13994 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC130P13994 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC130P13994 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC130P13994 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC130P13994 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC130P13994 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC130P13994 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC130P13994 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC130P13994 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC130P13994 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC130P13994 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC130P13994 BX323043.1-201ENST00000641006 1765 ntBASIC20.01■□□□□ 0.79
CCDC130P13994 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CCDC130P13994 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC130P13994 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC130P13994 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC130P13994 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC130P13994 AL137013.1-201ENST00000432946 1228 ntBASIC20.01■□□□□ 0.79
CCDC130P13994 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.01■□□□□ 0.79
CCDC130P13994 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC130P13994 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC130P13994 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
CCDC130P13994 RN7SL850P-201ENST00000579959 291 ntBASIC20.01■□□□□ 0.79
CCDC130P13994 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC130P13994 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC130P13994 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC130P13994 KRT8P45-201ENST00000414328 1447 ntBASIC20.01■□□□□ 0.79
CCDC130P13994 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC130P13994 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC130P13994 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC130P13994 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms