Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
SRFP11831 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SRFP11831 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.16■□□□□ 0.66
SRFP11831 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.16■□□□□ 0.66
SRFP11831 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SRFP11831 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.16■□□□□ 0.66
SRFP11831 REXO1L6P-202ENST00000619970 1078 ntBASIC19.16■□□□□ 0.66
SRFP11831 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
SRFP11831 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.16■□□□□ 0.66
SRFP11831 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SRFP11831 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SRFP11831 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.16■□□□□ 0.66
SRFP11831 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFP11831 LINC00565-201ENST00000562710 2331 ntBASIC19.16■□□□□ 0.66
SRFP11831 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SRFP11831 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SRFP11831 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SRFP11831 KRT18P13-201ENST00000400056 1290 ntBASIC19.15■□□□□ 0.66
SRFP11831 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.15■□□□□ 0.66
SRFP11831 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SRFP11831 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.15■□□□□ 0.66
SRFP11831 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.15■□□□□ 0.66
SRFP11831 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRFP11831 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.15■□□□□ 0.66
SRFP11831 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFP11831 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRFP11831 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRFP11831 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.14■□□□□ 0.65
SRFP11831 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SRFP11831 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
SRFP11831 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SRFP11831 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SRFP11831 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SRFP11831 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SRFP11831 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.14■□□□□ 0.65
SRFP11831 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 VENTXP7-201ENST00000475503 772 ntBASIC19.14■□□□□ 0.65
SRFP11831 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SRFP11831 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.14■□□□□ 0.65
SRFP11831 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.14■□□□□ 0.65
SRFP11831 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.14■□□□□ 0.65
SRFP11831 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.14■□□□□ 0.65
SRFP11831 AL592071.1-201ENST00000611956 408 ntBASIC19.14■□□□□ 0.65
SRFP11831 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.14■□□□□ 0.65
SRFP11831 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.14■□□□□ 0.65
SRFP11831 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.14■□□□□ 0.65
SRFP11831 AF228730.7-201ENST00000641842 219 ntBASIC19.14■□□□□ 0.65
SRFP11831 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SRFP11831 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 AL391422.3-201ENST00000603791 2761 ntBASIC19.14■□□□□ 0.65
SRFP11831 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.14■□□□□ 0.65
SRFP11831 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.14■□□□□ 0.65
SRFP11831 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRFP11831 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRFP11831 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRFP11831 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.13■□□□□ 0.65
SRFP11831 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SRFP11831 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.13■□□□□ 0.65
SRFP11831 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRFP11831 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SRFP11831 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRFP11831 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRFP11831 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.13■□□□□ 0.65
SRFP11831 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.13■□□□□ 0.65
SRFP11831 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.13■□□□□ 0.65
SRFP11831 GUSBP12-201ENST00000513727 720 ntBASIC19.13■□□□□ 0.65
SRFP11831 AP001005.1-201ENST00000571755 1248 ntBASIC19.13■□□□□ 0.65
SRFP11831 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.13■□□□□ 0.65
SRFP11831 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRFP11831 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRFP11831 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRFP11831 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms