Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 BX323043.1-201ENST00000641006 1765 ntBASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 AL359075.1-203ENST00000462729 1002 ntBASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB40ALP0C0E4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40ALP0C0E4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 FAM86EP-206ENST00000510506 987 ntBASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.83■□□□□ 0.44
RAB40ALP0C0E4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 AC087289.5-201ENST00000586076 3175 ntBASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 STARP1-201ENST00000397973 869 ntBASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 MIR4674-201ENST00000582457 87 ntBASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 AC018445.3-201ENST00000624177 1945 ntBASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
RAB40ALP0C0E4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms