Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.3■■□□□ 1
CYP3A4P08684 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.3■■□□□ 1
CYP3A4P08684 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.3■■□□□ 1
CYP3A4P08684 AC139887.4-201ENST00000607877 719 ntBASIC21.3■■□□□ 1
CYP3A4P08684 AL031432.5-201ENST00000641059 760 ntBASIC21.3■■□□□ 1
CYP3A4P08684 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.3■■□□□ 1
CYP3A4P08684 AC036111.1-201ENST00000533973 1582 ntBASIC21.3■■□□□ 1
CYP3A4P08684 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.3■■□□□ 1
CYP3A4P08684 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CYP3A4P08684 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.29■■□□□ 1
CYP3A4P08684 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 HEIH-201ENST00000623091 1652 ntBASIC21.29■■□□□ 1
CYP3A4P08684 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.29■■□□□ 1
CYP3A4P08684 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.29■■□□□ 1
CYP3A4P08684 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.29■■□□□ 1
CYP3A4P08684 DUX4L26-201ENST00000489078 1255 ntBASIC21.29■■□□□ 1
CYP3A4P08684 YBX1P2-201ENST00000489612 999 ntBASIC21.29■■□□□ 1
CYP3A4P08684 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.29■■□□□ 1
CYP3A4P08684 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CYP3A4P08684 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.29■■□□□ 1
CYP3A4P08684 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.29■■□□□ 1
CYP3A4P08684 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CYP3A4P08684 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYP3A4P08684 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.28■■□□□ 1
CYP3A4P08684 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.28■■□□□ 1
CYP3A4P08684 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CYP3A4P08684 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CYP3A4P08684 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CYP3A4P08684 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
CYP3A4P08684 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.28■■□□□ 1
CYP3A4P08684 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.28■■□□□ 1
CYP3A4P08684 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CYP3A4P08684 MIR564-202ENST00000385049 94 ntBASIC21.28■■□□□ 1
CYP3A4P08684 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.28■■□□□ 1
CYP3A4P08684 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.28■■□□□ 1
CYP3A4P08684 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.28■■□□□ 1
CYP3A4P08684 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 AC011558.1-201ENST00000623459 338 ntBASIC21.28■■□□□ 1
CYP3A4P08684 AC083906.6-201ENST00000641366 219 ntBASIC21.28■■□□□ 1
CYP3A4P08684 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.28■■□□□ 1
CYP3A4P08684 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
CYP3A4P08684 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYP3A4P08684 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.27■■□□□ 1
CYP3A4P08684 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.27■■□□□ 1
CYP3A4P08684 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CYP3A4P08684 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYP3A4P08684 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.27■■□□□ 1
CYP3A4P08684 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYP3A4P08684 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CYP3A4P08684 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CYP3A4P08684 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYP3A4P08684 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.27■■□□□ 1
CYP3A4P08684 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYP3A4P08684 AP000523.1-201ENST00000398242 1049 ntBASIC21.27■■□□□ 1
CYP3A4P08684 AK4P3-201ENST00000418260 669 ntBASIC21.27■■□□□ 1
CYP3A4P08684 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.27■■□□□ 1
CYP3A4P08684 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.27■■□□□ 1
CYP3A4P08684 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.27■■□□□ 1
CYP3A4P08684 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.27■□□□□ 0.99
CYP3A4P08684 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.27■□□□□ 0.99
CYP3A4P08684 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CYP3A4P08684 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CYP3A4P08684 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CYP3A4P08684 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CYP3A4P08684 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.26■□□□□ 0.99
CYP3A4P08684 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.26■□□□□ 0.99
CYP3A4P08684 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYP3A4P08684 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYP3A4P08684 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYP3A4P08684 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYP3A4P08684 RNF152P1-201ENST00000397754 604 ntBASIC21.26■□□□□ 0.99
CYP3A4P08684 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CYP3A4P08684 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms