Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.21■□□□□ 0.67
HLA-DQB2P05538 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 MIR1238-201ENST00000408483 83 ntBASIC19.2■□□□□ 0.66
HLA-DQB2P05538 FITM1-202ENST00000559294 800 ntBASIC19.2■□□□□ 0.66
HLA-DQB2P05538 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQB2P05538 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 AC008622.2-201ENST00000617006 1229 ntBASIC19.19■□□□□ 0.66
HLA-DQB2P05538 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 AL512353.2-201ENST00000448759 1962 ntBASIC19.19■□□□□ 0.66
HLA-DQB2P05538 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DQB2P05538 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQB2P05538 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 KRT8P32-201ENST00000512863 1461 ntBASIC19.17■□□□□ 0.66
HLA-DQB2P05538 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms