Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCCBP05166 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.76■□□□□ 0.59
PCCBP05166 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.76■□□□□ 0.59
PCCBP05166 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCCBP05166 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCCBP05166 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCCBP05166 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCCBP05166 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PCCBP05166 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.75■□□□□ 0.59
PCCBP05166 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCCBP05166 AC141586.3-201ENST00000562166 1838 ntBASIC18.75■□□□□ 0.59
PCCBP05166 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCCBP05166 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCCBP05166 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.75■□□□□ 0.59
PCCBP05166 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.75■□□□□ 0.59
PCCBP05166 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCCBP05166 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.75■□□□□ 0.59
PCCBP05166 AC022616.7-201ENST00000525383 220 ntBASIC18.75■□□□□ 0.59
PCCBP05166 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 AC140113.3-201ENST00000605663 199 ntBASIC18.75■□□□□ 0.59
PCCBP05166 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.75■□□□□ 0.59
PCCBP05166 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.75■□□□□ 0.59
PCCBP05166 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.75■□□□□ 0.59
PCCBP05166 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCCBP05166 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.74■□□□□ 0.59
PCCBP05166 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.74■□□□□ 0.59
PCCBP05166 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.74■□□□□ 0.59
PCCBP05166 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.74■□□□□ 0.59
PCCBP05166 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.74■□□□□ 0.59
PCCBP05166 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 RNF152P1-201ENST00000397754 604 ntBASIC18.74■□□□□ 0.59
PCCBP05166 AL023284.2-201ENST00000405850 579 ntBASIC18.74■□□□□ 0.59
PCCBP05166 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.74■□□□□ 0.59
PCCBP05166 AC092647.4-201ENST00000457211 535 ntBASIC18.74■□□□□ 0.59
PCCBP05166 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.74■□□□□ 0.59
PCCBP05166 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.74■□□□□ 0.59
PCCBP05166 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.74■□□□□ 0.59
PCCBP05166 AC087388.1-201ENST00000571370 1112 ntBASIC18.74■□□□□ 0.59
PCCBP05166 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.74■□□□□ 0.59
PCCBP05166 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.74■□□□□ 0.59
PCCBP05166 CR769767.2-201ENST00000622735 460 ntBASIC18.74■□□□□ 0.59
PCCBP05166 AC011558.1-201ENST00000623459 338 ntBASIC18.74■□□□□ 0.59
PCCBP05166 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCCBP05166 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCCBP05166 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.74■□□□□ 0.59
PCCBP05166 KRT8P3-201ENST00000519669 1449 ntBASIC18.74■□□□□ 0.59
PCCBP05166 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCCBP05166 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCCBP05166 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.73■□□□□ 0.59
PCCBP05166 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.73■□□□□ 0.59
PCCBP05166 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
PCCBP05166 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCCBP05166 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.73■□□□□ 0.59
PCCBP05166 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.73■□□□□ 0.59
PCCBP05166 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.73■□□□□ 0.59
PCCBP05166 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.73■□□□□ 0.59
PCCBP05166 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCCBP05166 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.73■□□□□ 0.59
PCCBP05166 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PCCBP05166 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCCBP05166 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 AC036111.1-201ENST00000533973 1582 ntBASIC18.72■□□□□ 0.59
PCCBP05166 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms