Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGN1P05114 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HMGN1P05114 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGN1P05114 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGN1P05114 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGN1P05114 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGN1P05114 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HMGN1P05114 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGN1P05114 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGN1P05114 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGN1P05114 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGN1P05114 AC097658.1-201ENST00000475555 843 ntBASIC17.16■□□□□ 0.34
HMGN1P05114 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGN1P05114 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGN1P05114 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGN1P05114 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGN1P05114 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGN1P05114 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HMGN1P05114 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGN1P05114 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGN1P05114 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HMGN1P05114 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HMGN1P05114 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HMGN1P05114 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGN1P05114 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.15■□□□□ 0.34
HMGN1P05114 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HMGN1P05114 PNMA6B-201ENST00000538162 1200 ntBASIC17.15■□□□□ 0.34
HMGN1P05114 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.15■□□□□ 0.34
HMGN1P05114 MIR4758-201ENST00000577688 71 ntBASIC17.15■□□□□ 0.34
HMGN1P05114 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
HMGN1P05114 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.15■□□□□ 0.34
HMGN1P05114 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
HMGN1P05114 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
HMGN1P05114 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGN1P05114 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.14■□□□□ 0.34
HMGN1P05114 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HMGN1P05114 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HMGN1P05114 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HMGN1P05114 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGN1P05114 SLC29A4P1-201ENST00000398760 971 ntBASIC17.14■□□□□ 0.33
HMGN1P05114 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGN1P05114 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGN1P05114 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGN1P05114 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.14■□□□□ 0.33
HMGN1P05114 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
HMGN1P05114 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGN1P05114 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGN1P05114 AC060766.5-201ENST00000590539 871 ntBASIC17.14■□□□□ 0.33
HMGN1P05114 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGN1P05114 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HMGN1P05114 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HMGN1P05114 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMGN1P05114 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGN1P05114 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms