Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.29■□□□□ 0.68
MT-ND3P03897 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MT-ND3P03897 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.29■□□□□ 0.68
MT-ND3P03897 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MT-ND3P03897 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.28■□□□□ 0.68
MT-ND3P03897 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MT-ND3P03897 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.28■□□□□ 0.68
MT-ND3P03897 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.28■□□□□ 0.68
MT-ND3P03897 AC018470.1-201ENST00000624790 3129 ntBASIC19.28■□□□□ 0.68
MT-ND3P03897 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.28■□□□□ 0.68
MT-ND3P03897 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.28■□□□□ 0.68
MT-ND3P03897 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.28■□□□□ 0.68
MT-ND3P03897 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.28■□□□□ 0.68
MT-ND3P03897 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.28■□□□□ 0.68
MT-ND3P03897 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MT-ND3P03897 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 AL512353.2-201ENST00000448759 1962 ntBASIC19.28■□□□□ 0.68
MT-ND3P03897 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
MT-ND3P03897 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND3P03897 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.27■□□□□ 0.68
MT-ND3P03897 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.27■□□□□ 0.68
MT-ND3P03897 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-ND3P03897 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MT-ND3P03897 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-ND3P03897 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.27■□□□□ 0.68
MT-ND3P03897 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-ND3P03897 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-ND3P03897 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MT-ND3P03897 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.27■□□□□ 0.68
MT-ND3P03897 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-ND3P03897 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND3P03897 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MT-ND3P03897 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MT-ND3P03897 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.27■□□□□ 0.67
MT-ND3P03897 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MT-ND3P03897 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MT-ND3P03897 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MT-ND3P03897 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MT-ND3P03897 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.27■□□□□ 0.67
MT-ND3P03897 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.27■□□□□ 0.67
MT-ND3P03897 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.26■□□□□ 0.67
MT-ND3P03897 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND3P03897 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND3P03897 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND3P03897 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND3P03897 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MT-ND3P03897 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MT-ND3P03897 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND3P03897 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MT-ND3P03897 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND3P03897 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND3P03897 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MT-ND3P03897 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND3P03897 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND3P03897 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND3P03897 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND3P03897 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND3P03897 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MT-ND3P03897 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MT-ND3P03897 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
MT-ND3P03897 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND3P03897 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND3P03897 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms