Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APOA1P02647 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
APOA1P02647 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.88■□□□□ 0.29
APOA1P02647 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 AL139384.1-201ENST00000612143 3047 ntBASIC16.87■□□□□ 0.29
APOA1P02647 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.87■□□□□ 0.29
APOA1P02647 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
APOA1P02647 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.87■□□□□ 0.29
APOA1P02647 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
APOA1P02647 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 AL136116.3-201ENST00000402907 1138 ntBASIC16.87■□□□□ 0.29
APOA1P02647 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
APOA1P02647 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.87■□□□□ 0.29
APOA1P02647 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.87■□□□□ 0.29
APOA1P02647 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.87■□□□□ 0.29
APOA1P02647 AP001160.3-201ENST00000601484 763 ntBASIC16.87■□□□□ 0.29
APOA1P02647 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.87■□□□□ 0.29
APOA1P02647 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.87■□□□□ 0.29
APOA1P02647 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.87■□□□□ 0.29
APOA1P02647 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
APOA1P02647 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOA1P02647 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.87■□□□□ 0.29
APOA1P02647 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.86■□□□□ 0.29
APOA1P02647 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
APOA1P02647 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
APOA1P02647 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
APOA1P02647 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
APOA1P02647 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 PHGDH-210ENST00000641115 1638 ntBASIC16.86■□□□□ 0.29
APOA1P02647 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 TEX21P-204ENST00000641479 1693 ntBASIC16.86■□□□□ 0.29
APOA1P02647 IRS3P-201ENST00000223076 1006 ntBASIC16.86■□□□□ 0.29
APOA1P02647 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.86■□□□□ 0.29
APOA1P02647 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.86■□□□□ 0.29
APOA1P02647 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.86■□□□□ 0.29
APOA1P02647 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.86■□□□□ 0.29
APOA1P02647 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.86■□□□□ 0.29
APOA1P02647 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.86■□□□□ 0.29
APOA1P02647 PCDHA12-202ENST00000613593 2588 ntBASIC16.86■□□□□ 0.29
APOA1P02647 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.86■□□□□ 0.29
APOA1P02647 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
APOA1P02647 AC073592.3-201ENST00000625118 1834 ntBASIC16.86■□□□□ 0.29
APOA1P02647 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
APOA1P02647 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.86■□□□□ 0.29
APOA1P02647 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.86■□□□□ 0.29
APOA1P02647 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.86■□□□□ 0.29
APOA1P02647 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
APOA1P02647 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOA1P02647 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOA1P02647 LINC00896-202ENST00000609602 2128 ntBASIC16.85■□□□□ 0.29
APOA1P02647 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
APOA1P02647 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
APOA1P02647 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOA1P02647 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOA1P02647 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOA1P02647 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.85■□□□□ 0.29
APOA1P02647 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
APOA1P02647 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOA1P02647 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms