Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.03■□□□□ 0.64
PDGFBP01127 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFBP01127 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PDGFBP01127 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.02■□□□□ 0.64
PDGFBP01127 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.02■□□□□ 0.64
PDGFBP01127 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.02■□□□□ 0.64
PDGFBP01127 RN7SL606P-201ENST00000472779 293 ntBASIC19.02■□□□□ 0.64
PDGFBP01127 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.02■□□□□ 0.64
PDGFBP01127 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PDGFBP01127 AC139887.3-201ENST00000568585 713 ntBASIC19.02■□□□□ 0.64
PDGFBP01127 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.02■□□□□ 0.64
PDGFBP01127 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 GPR32P1-201ENST00000601788 811 ntBASIC19.02■□□□□ 0.64
PDGFBP01127 AC140113.2-201ENST00000604370 208 ntBASIC19.02■□□□□ 0.64
PDGFBP01127 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.02■□□□□ 0.64
PDGFBP01127 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PDGFBP01127 AP005212.1-201ENST00000581547 1997 ntBASIC19.02■□□□□ 0.64
PDGFBP01127 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFBP01127 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFBP01127 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFBP01127 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 AC133561.1-201ENST00000568600 2415 ntBASIC19.01■□□□□ 0.63
PDGFBP01127 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFBP01127 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFBP01127 RPS8P6-201ENST00000426177 609 ntBASIC19.01■□□□□ 0.63
PDGFBP01127 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFBP01127 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFBP01127 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PDGFBP01127 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.01■□□□□ 0.63
PDGFBP01127 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFBP01127 AC010240.3-201ENST00000607688 395 ntBASIC19.01■□□□□ 0.63
PDGFBP01127 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.01■□□□□ 0.63
PDGFBP01127 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 ZNF259P1-201ENST00000407656 1365 ntBASIC19.01■□□□□ 0.63
PDGFBP01127 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFBP01127 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19■□□□□ 0.63
PDGFBP01127 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19■□□□□ 0.63
PDGFBP01127 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDGFBP01127 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PDGFBP01127 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
PDGFBP01127 AC018712.1-201ENST00000455767 687 ntBASIC19■□□□□ 0.63
PDGFBP01127 MINOS1P3-201ENST00000457048 203 ntBASIC19■□□□□ 0.63
PDGFBP01127 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19■□□□□ 0.63
PDGFBP01127 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19■□□□□ 0.63
PDGFBP01127 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19■□□□□ 0.63
PDGFBP01127 AC010327.4-202ENST00000591484 748 ntBASIC19■□□□□ 0.63
PDGFBP01127 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
PDGFBP01127 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19■□□□□ 0.63
PDGFBP01127 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDGFBP01127 EP400NL-214ENST00000641289 2402 ntBASIC19■□□□□ 0.63
PDGFBP01127 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19■□□□□ 0.63
PDGFBP01127 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFBP01127 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 AC098831.1-202ENST00000438821 336 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms