Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
BRD4O60885 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
BRD4O60885 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
BRD4O60885 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.18■■□□□ 1.78
BRD4O60885 ILF2-202ENST00000368681 726 ntTSL 2 BASIC26.18■■□□□ 1.78
BRD4O60885 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC26.18■■□□□ 1.78
BRD4O60885 DUSP5P1-201ENST00000441325 1139 ntBASIC26.18■■□□□ 1.78
BRD4O60885 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC26.18■■□□□ 1.78
BRD4O60885 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC26.18■■□□□ 1.78
BRD4O60885 ZNF444P1-201ENST00000559497 298 ntBASIC26.18■■□□□ 1.78
BRD4O60885 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC26.18■■□□□ 1.78
BRD4O60885 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
BRD4O60885 DFFB-212ENST00000625756 649 ntTSL 5 BASIC26.18■■□□□ 1.78
BRD4O60885 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
BRD4O60885 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC26.18■■□□□ 1.78
BRD4O60885 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC26.18■■□□□ 1.78
BRD4O60885 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC26.18■■□□□ 1.78
BRD4O60885 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
BRD4O60885 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BRD4O60885 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
BRD4O60885 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BRD4O60885 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BRD4O60885 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BRD4O60885 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC26.17■■□□□ 1.78
BRD4O60885 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC26.17■■□□□ 1.78
BRD4O60885 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BRD4O60885 Telomerase-vert.1-201ENST00000363312 438 ntBASIC26.17■■□□□ 1.78
BRD4O60885 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BRD4O60885 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
BRD4O60885 AC112907.2-201ENST00000448639 330 ntBASIC26.17■■□□□ 1.78
BRD4O60885 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC26.17■■□□□ 1.78
BRD4O60885 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
BRD4O60885 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BRD4O60885 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BRD4O60885 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC26.16■■□□□ 1.78
BRD4O60885 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC26.16■■□□□ 1.78
BRD4O60885 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
BRD4O60885 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC26.16■■□□□ 1.78
BRD4O60885 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BRD4O60885 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
BRD4O60885 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC26.16■■□□□ 1.78
BRD4O60885 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC26.16■■□□□ 1.78
BRD4O60885 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC26.16■■□□□ 1.78
BRD4O60885 TEX21P-204ENST00000641479 1693 ntBASIC26.16■■□□□ 1.78
BRD4O60885 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
BRD4O60885 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
BRD4O60885 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC26.15■■□□□ 1.78
BRD4O60885 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BRD4O60885 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC26.15■■□□□ 1.78
BRD4O60885 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BRD4O60885 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BRD4O60885 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC26.15■■□□□ 1.78
BRD4O60885 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
BRD4O60885 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
BRD4O60885 SDHAP1-207ENST00000440850 2000 ntBASIC26.15■■□□□ 1.78
BRD4O60885 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
BRD4O60885 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BRD4O60885 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BRD4O60885 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BRD4O60885 VENTXP5-201ENST00000523979 775 ntBASIC26.15■■□□□ 1.78
BRD4O60885 MIR4674-201ENST00000582457 87 ntBASIC26.15■■□□□ 1.78
BRD4O60885 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BRD4O60885 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC26.14■■□□□ 1.78
BRD4O60885 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC26.14■■□□□ 1.78
BRD4O60885 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC26.14■■□□□ 1.78
BRD4O60885 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC26.14■■□□□ 1.78
BRD4O60885 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
BRD4O60885 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC26.14■■□□□ 1.78
BRD4O60885 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BRD4O60885 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
BRD4O60885 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC26.14■■□□□ 1.77
BRD4O60885 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
BRD4O60885 AC018445.3-201ENST00000624177 1945 ntBASIC26.14■■□□□ 1.77
BRD4O60885 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC26.14■■□□□ 1.77
BRD4O60885 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
BRD4O60885 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC26.14■■□□□ 1.77
BRD4O60885 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.77
BRD4O60885 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
BRD4O60885 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
BRD4O60885 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC26.13■■□□□ 1.77
BRD4O60885 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
BRD4O60885 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
BRD4O60885 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC26.13■■□□□ 1.77
BRD4O60885 GCSHP2-201ENST00000560971 527 ntBASIC26.13■■□□□ 1.77
BRD4O60885 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC26.13■■□□□ 1.77
BRD4O60885 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC26.13■■□□□ 1.77
BRD4O60885 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
BRD4O60885 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
BRD4O60885 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC26.13■■□□□ 1.77
BRD4O60885 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC26.13■■□□□ 1.77
BRD4O60885 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
BRD4O60885 AC141586.3-201ENST00000562166 1838 ntBASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms