Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
CACNA1FO60840 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CACNA1FO60840 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.84■■□□□ 1.41
CACNA1FO60840 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CACNA1FO60840 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.84■■□□□ 1.41
CACNA1FO60840 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CACNA1FO60840 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CACNA1FO60840 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CACNA1FO60840 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.84■■□□□ 1.41
CACNA1FO60840 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CACNA1FO60840 LINC01238-205ENST00000567549 1107 ntBASIC23.84■■□□□ 1.41
CACNA1FO60840 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.84■■□□□ 1.41
CACNA1FO60840 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.84■■□□□ 1.41
CACNA1FO60840 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.84■■□□□ 1.41
CACNA1FO60840 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
CACNA1FO60840 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.84■■□□□ 1.41
CACNA1FO60840 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CACNA1FO60840 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.84■■□□□ 1.41
CACNA1FO60840 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.84■■□□□ 1.41
CACNA1FO60840 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CACNA1FO60840 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CACNA1FO60840 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 HBZP1-201ENST00000354915 429 ntBASIC23.83■■□□□ 1.41
CACNA1FO60840 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.83■■□□□ 1.41
CACNA1FO60840 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.83■■□□□ 1.41
CACNA1FO60840 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 KRT8P7-201ENST00000533003 1432 ntBASIC23.83■■□□□ 1.41
CACNA1FO60840 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CACNA1FO60840 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.83■■□□□ 1.41
CACNA1FO60840 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.83■■□□□ 1.41
CACNA1FO60840 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.83■■□□□ 1.41
CACNA1FO60840 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNA1FO60840 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.83■■□□□ 1.41
CACNA1FO60840 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.83■■□□□ 1.41
CACNA1FO60840 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CACNA1FO60840 AC008556.1-201ENST00000610908 2040 ntBASIC23.83■■□□□ 1.4
CACNA1FO60840 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CACNA1FO60840 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CACNA1FO60840 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.83■■□□□ 1.4
CACNA1FO60840 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CACNA1FO60840 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CACNA1FO60840 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.82■■□□□ 1.4
CACNA1FO60840 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.82■■□□□ 1.4
CACNA1FO60840 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CACNA1FO60840 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.82■■□□□ 1.4
CACNA1FO60840 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CACNA1FO60840 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CACNA1FO60840 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CACNA1FO60840 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CACNA1FO60840 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CACNA1FO60840 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CACNA1FO60840 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.82■■□□□ 1.4
CACNA1FO60840 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.82■■□□□ 1.4
CACNA1FO60840 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.82■■□□□ 1.4
CACNA1FO60840 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CACNA1FO60840 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CACNA1FO60840 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CACNA1FO60840 SPDYE15P-201ENST00000424157 909 ntBASIC23.82■■□□□ 1.4
CACNA1FO60840 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CACNA1FO60840 AC104390.1-201ENST00000555663 520 ntBASIC23.82■■□□□ 1.4
CACNA1FO60840 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.82■■□□□ 1.4
CACNA1FO60840 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CACNA1FO60840 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CACNA1FO60840 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.81■■□□□ 1.4
CACNA1FO60840 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
CACNA1FO60840 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CACNA1FO60840 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
CACNA1FO60840 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNA1FO60840 VENTXP5-201ENST00000523979 775 ntBASIC23.81■■□□□ 1.4
CACNA1FO60840 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.81■■□□□ 1.4
CACNA1FO60840 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.81■■□□□ 1.4
CACNA1FO60840 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNA1FO60840 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CACNA1FO60840 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.8■■□□□ 1.4
CACNA1FO60840 KRT8P50-201ENST00000562022 1438 ntBASIC23.8■■□□□ 1.4
CACNA1FO60840 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.8■■□□□ 1.4
CACNA1FO60840 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.8■■□□□ 1.4
CACNA1FO60840 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNA1FO60840 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNA1FO60840 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNA1FO60840 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CACNA1FO60840 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.79■■□□□ 1.4
CACNA1FO60840 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms