Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.87■□□□□ 0.45
URB1O60287 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
URB1O60287 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
URB1O60287 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.87■□□□□ 0.45
URB1O60287 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.87■□□□□ 0.45
URB1O60287 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
URB1O60287 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
URB1O60287 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.86■□□□□ 0.45
URB1O60287 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.86■□□□□ 0.45
URB1O60287 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 MIR662-201ENST00000384847 95 ntBASIC17.86■□□□□ 0.45
URB1O60287 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.86■□□□□ 0.45
URB1O60287 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.86■□□□□ 0.45
URB1O60287 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.86■□□□□ 0.45
URB1O60287 AL773604.1-201ENST00000617417 272 ntBASIC17.86■□□□□ 0.45
URB1O60287 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
URB1O60287 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
URB1O60287 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
URB1O60287 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.86■□□□□ 0.45
URB1O60287 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.86■□□□□ 0.45
URB1O60287 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.86■□□□□ 0.45
URB1O60287 FOSL1P1-201ENST00000511041 816 ntBASIC17.86■□□□□ 0.45
URB1O60287 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
URB1O60287 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
URB1O60287 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.85■□□□□ 0.45
URB1O60287 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
URB1O60287 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
URB1O60287 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.85■□□□□ 0.45
URB1O60287 LINC00265-3P-201ENST00000447588 903 ntBASIC17.85■□□□□ 0.45
URB1O60287 POLD2P1-201ENST00000511220 997 ntBASIC17.85■□□□□ 0.45
URB1O60287 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.85■□□□□ 0.45
URB1O60287 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.85■□□□□ 0.45
URB1O60287 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
URB1O60287 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.85■□□□□ 0.45
URB1O60287 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
URB1O60287 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
URB1O60287 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.84■□□□□ 0.45
URB1O60287 SLC25A1P1-201ENST00000528351 927 ntBASIC17.84■□□□□ 0.45
URB1O60287 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.84■□□□□ 0.45
URB1O60287 RNF126P1-202ENST00000569893 925 ntBASIC17.84■□□□□ 0.45
URB1O60287 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
URB1O60287 AC064862.7-201ENST00000604520 867 ntBASIC17.84■□□□□ 0.45
URB1O60287 AL139424.1-201ENST00000607572 797 ntBASIC17.84■□□□□ 0.45
URB1O60287 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.84■□□□□ 0.45
URB1O60287 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.84■□□□□ 0.45
URB1O60287 KRT8P11-201ENST00000409686 1436 ntBASIC17.84■□□□□ 0.45
URB1O60287 LINC00167-201ENST00000530583 1419 ntBASIC17.84■□□□□ 0.45
URB1O60287 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
URB1O60287 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.84■□□□□ 0.45
URB1O60287 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.84■□□□□ 0.45
URB1O60287 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
URB1O60287 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.84■□□□□ 0.45
URB1O60287 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.84■□□□□ 0.45
URB1O60287 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.84■□□□□ 0.45
URB1O60287 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
URB1O60287 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
URB1O60287 AC036111.1-201ENST00000533973 1582 ntBASIC17.83■□□□□ 0.45
URB1O60287 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms