Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.37■□□□□ 0.37
IDH3BO43837 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.36■□□□□ 0.37
IDH3BO43837 AC092368.3-202ENST00000574180 1591 ntBASIC17.36■□□□□ 0.37
IDH3BO43837 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 AC104417.2-201ENST00000562989 1793 ntBASIC17.36■□□□□ 0.37
IDH3BO43837 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
IDH3BO43837 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.36■□□□□ 0.37
IDH3BO43837 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.36■□□□□ 0.37
IDH3BO43837 NCF1B-203ENST00000435988 1254 ntBASIC17.36■□□□□ 0.37
IDH3BO43837 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.36■□□□□ 0.37
IDH3BO43837 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.36■□□□□ 0.37
IDH3BO43837 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.36■□□□□ 0.37
IDH3BO43837 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
IDH3BO43837 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.36■□□□□ 0.37
IDH3BO43837 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
IDH3BO43837 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
IDH3BO43837 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3BO43837 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.36■□□□□ 0.37
IDH3BO43837 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.36■□□□□ 0.37
IDH3BO43837 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.35■□□□□ 0.37
IDH3BO43837 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.35■□□□□ 0.37
IDH3BO43837 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IDH3BO43837 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 TSPY6P-201ENST00000448518 926 ntBASIC17.35■□□□□ 0.37
IDH3BO43837 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3BO43837 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3BO43837 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3BO43837 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.35■□□□□ 0.37
IDH3BO43837 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.35■□□□□ 0.37
IDH3BO43837 MYC-209ENST00000641252 345 ntBASIC17.35■□□□□ 0.37
IDH3BO43837 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
IDH3BO43837 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.35■□□□□ 0.37
IDH3BO43837 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.35■□□□□ 0.37
IDH3BO43837 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3BO43837 AC124283.5-201ENST00000624661 1809 ntBASIC17.35■□□□□ 0.37
IDH3BO43837 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3BO43837 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IDH3BO43837 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3BO43837 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.35■□□□□ 0.37
IDH3BO43837 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 AC099398.1-201ENST00000567919 2776 ntBASIC17.34■□□□□ 0.37
IDH3BO43837 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms