Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC24.39■■□□□ 1.49
KCNQ2O43526 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.39■■□□□ 1.49
KCNQ2O43526 Z69720.1-201ENST00000601483 472 ntBASIC24.39■■□□□ 1.49
KCNQ2O43526 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
KCNQ2O43526 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
KCNQ2O43526 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
KCNQ2O43526 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.39■■□□□ 1.49
KCNQ2O43526 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
KCNQ2O43526 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.38■■□□□ 1.49
KCNQ2O43526 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
KCNQ2O43526 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 KRT8P3-201ENST00000519669 1449 ntBASIC24.38■■□□□ 1.49
KCNQ2O43526 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC24.38■■□□□ 1.49
KCNQ2O43526 AC012676.1-201ENST00000574705 1949 ntBASIC24.38■■□□□ 1.49
KCNQ2O43526 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 MIR564-202ENST00000385049 94 ntBASIC24.38■■□□□ 1.49
KCNQ2O43526 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
KCNQ2O43526 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC24.38■■□□□ 1.49
KCNQ2O43526 AC148477.8-201ENST00000624298 468 ntBASIC24.38■■□□□ 1.49
KCNQ2O43526 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.38■■□□□ 1.49
KCNQ2O43526 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
KCNQ2O43526 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
KCNQ2O43526 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNQ2O43526 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.38■■□□□ 1.49
KCNQ2O43526 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.37■■□□□ 1.49
KCNQ2O43526 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 LINC00565-201ENST00000562710 2331 ntBASIC24.37■■□□□ 1.49
KCNQ2O43526 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNQ2O43526 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
KCNQ2O43526 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNQ2O43526 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
KCNQ2O43526 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC24.37■■□□□ 1.49
KCNQ2O43526 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.37■■□□□ 1.49
KCNQ2O43526 AC010240.3-201ENST00000607688 395 ntBASIC24.37■■□□□ 1.49
KCNQ2O43526 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.37■■□□□ 1.49
KCNQ2O43526 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24.37■■□□□ 1.49
KCNQ2O43526 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNQ2O43526 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNQ2O43526 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNQ2O43526 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
KCNQ2O43526 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNQ2O43526 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
KCNQ2O43526 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNQ2O43526 NSUN5P1-202ENST00000421140 1535 ntBASIC24.36■■□□□ 1.49
KCNQ2O43526 NSUN5P2-203ENST00000457352 1529 ntBASIC24.36■■□□□ 1.49
KCNQ2O43526 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNQ2O43526 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNQ2O43526 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNQ2O43526 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC24.36■■□□□ 1.49
KCNQ2O43526 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC24.36■■□□□ 1.49
KCNQ2O43526 AC106730.1-201ENST00000566722 1090 ntBASIC24.36■■□□□ 1.49
KCNQ2O43526 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC24.36■■□□□ 1.49
KCNQ2O43526 TERC-201ENST00000602385 541 ntBASIC24.36■■□□□ 1.49
KCNQ2O43526 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC24.36■■□□□ 1.49
KCNQ2O43526 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC24.36■■□□□ 1.49
KCNQ2O43526 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNQ2O43526 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC24.36■■□□□ 1.49
KCNQ2O43526 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
KCNQ2O43526 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
KCNQ2O43526 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.36■■□□□ 1.49
KCNQ2O43526 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNQ2O43526 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.35■■□□□ 1.49
KCNQ2O43526 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC24.35■■□□□ 1.49
KCNQ2O43526 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC24.35■■□□□ 1.49
KCNQ2O43526 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC24.35■■□□□ 1.49
KCNQ2O43526 NUS1P2-201ENST00000417358 873 ntBASIC24.35■■□□□ 1.49
KCNQ2O43526 KRT18P23-201ENST00000435622 1283 ntBASIC24.35■■□□□ 1.49
KCNQ2O43526 RN7SL606P-201ENST00000472779 293 ntBASIC24.35■■□□□ 1.49
KCNQ2O43526 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.35■■□□□ 1.49
KCNQ2O43526 AC104390.1-201ENST00000555663 520 ntBASIC24.35■■□□□ 1.49
KCNQ2O43526 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC24.35■■□□□ 1.49
KCNQ2O43526 AL592071.1-201ENST00000611956 408 ntBASIC24.35■■□□□ 1.49
KCNQ2O43526 AC124864.1-201ENST00000623408 392 ntBASIC24.35■■□□□ 1.49
KCNQ2O43526 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNQ2O43526 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms