Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF3O43395 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF3O43395 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.79■■□□□ 1.08
PRPF3O43395 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PRPF3O43395 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF3O43395 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF3O43395 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
PRPF3O43395 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.79■■□□□ 1.08
PRPF3O43395 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF3O43395 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.79■■□□□ 1.08
PRPF3O43395 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.79■■□□□ 1.08
PRPF3O43395 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF3O43395 NAPSB-206ENST00000562112 1266 ntBASIC21.79■■□□□ 1.08
PRPF3O43395 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF3O43395 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PRPF3O43395 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
PRPF3O43395 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF3O43395 AL023284.2-201ENST00000405850 579 ntBASIC21.78■■□□□ 1.08
PRPF3O43395 AC087499.1-201ENST00000418141 1075 ntBASIC21.78■■□□□ 1.08
PRPF3O43395 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.78■■□□□ 1.08
PRPF3O43395 AC007663.1-201ENST00000438948 1240 ntBASIC21.78■■□□□ 1.08
PRPF3O43395 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.78■■□□□ 1.08
PRPF3O43395 CCR12P-201ENST00000446203 998 ntBASIC21.78■■□□□ 1.08
PRPF3O43395 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.78■■□□□ 1.08
PRPF3O43395 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF3O43395 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.78■■□□□ 1.08
PRPF3O43395 AC116562.4-202ENST00000641738 218 ntBASIC21.78■■□□□ 1.08
PRPF3O43395 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF3O43395 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF3O43395 RCC2P3-201ENST00000418112 1537 ntBASIC21.78■■□□□ 1.08
PRPF3O43395 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PRPF3O43395 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF3O43395 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF3O43395 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.78■■□□□ 1.08
PRPF3O43395 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF3O43395 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PRPF3O43395 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF3O43395 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PRPF3O43395 GPAT2P1-201ENST00000444924 1672 ntBASIC21.77■■□□□ 1.08
PRPF3O43395 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.77■■□□□ 1.08
PRPF3O43395 INGX-201ENST00000359239 846 ntBASIC21.77■■□□□ 1.08
PRPF3O43395 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF3O43395 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.77■■□□□ 1.08
PRPF3O43395 AP003041.3-201ENST00000527151 707 ntBASIC21.77■■□□□ 1.08
PRPF3O43395 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF3O43395 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF3O43395 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF3O43395 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF3O43395 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.77■■□□□ 1.08
PRPF3O43395 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.77■■□□□ 1.08
PRPF3O43395 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.77■■□□□ 1.08
PRPF3O43395 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.77■■□□□ 1.07
PRPF3O43395 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PRPF3O43395 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.77■■□□□ 1.07
PRPF3O43395 AC093503.3-201ENST00000624917 2352 ntBASIC21.76■■□□□ 1.07
PRPF3O43395 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 MTMR9LP-203ENST00000426597 1545 ntBASIC21.76■■□□□ 1.07
PRPF3O43395 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.76■■□□□ 1.07
PRPF3O43395 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 MIR4674-201ENST00000582457 87 ntBASIC21.76■■□□□ 1.07
PRPF3O43395 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 AL031598.1-201ENST00000561511 1773 ntBASIC21.76■■□□□ 1.07
PRPF3O43395 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
PRPF3O43395 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF3O43395 AL109659.2-201ENST00000606809 1674 ntBASIC21.75■■□□□ 1.07
PRPF3O43395 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF3O43395 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF3O43395 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF3O43395 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PRPF3O43395 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF3O43395 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF3O43395 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.75■■□□□ 1.07
PRPF3O43395 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.75■■□□□ 1.07
PRPF3O43395 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF3O43395 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF3O43395 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.75■■□□□ 1.07
PRPF3O43395 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
PRPF3O43395 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.75■■□□□ 1.07
PRPF3O43395 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF3O43395 AC010653.2-201ENST00000623505 997 ntBASIC21.75■■□□□ 1.07
PRPF3O43395 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PRPF3O43395 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.75■■□□□ 1.07
PRPF3O43395 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.75■■□□□ 1.07
PRPF3O43395 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms