Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXA2O43364 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA2O43364 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HOXA2O43364 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXA2O43364 KRT18P23-201ENST00000435622 1283 ntBASIC20.24■□□□□ 0.83
HOXA2O43364 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
HOXA2O43364 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.24■□□□□ 0.83
HOXA2O43364 PRELID1P1-202ENST00000567272 903 ntBASIC20.24■□□□□ 0.83
HOXA2O43364 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXA2O43364 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
HOXA2O43364 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA2O43364 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA2O43364 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA2O43364 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXA2O43364 AL391807.1-203ENST00000604392 2365 ntBASIC20.23■□□□□ 0.83
HOXA2O43364 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXA2O43364 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXA2O43364 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 MIR662-201ENST00000384847 95 ntBASIC20.23■□□□□ 0.83
HOXA2O43364 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXA2O43364 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXA2O43364 AC026396.1-201ENST00000419388 421 ntBASIC20.23■□□□□ 0.83
HOXA2O43364 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.23■□□□□ 0.83
HOXA2O43364 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.23■□□□□ 0.83
HOXA2O43364 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
HOXA2O43364 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 AC079602.3-201ENST00000623931 403 ntBASIC20.23■□□□□ 0.83
HOXA2O43364 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXA2O43364 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXA2O43364 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
HOXA2O43364 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXA2O43364 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA2O43364 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 TEX21P-204ENST00000641479 1693 ntBASIC20.22■□□□□ 0.83
HOXA2O43364 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXA2O43364 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXA2O43364 AC112907.3-201ENST00000577781 2400 ntBASIC20.22■□□□□ 0.83
HOXA2O43364 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXA2O43364 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXA2O43364 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXA2O43364 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.22■□□□□ 0.83
HOXA2O43364 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.22■□□□□ 0.83
HOXA2O43364 AC104390.1-201ENST00000555663 520 ntBASIC20.22■□□□□ 0.83
HOXA2O43364 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.22■□□□□ 0.83
HOXA2O43364 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.22■□□□□ 0.83
HOXA2O43364 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXA2O43364 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXA2O43364 AC012313.10-201ENST00000623509 926 ntBASIC20.22■□□□□ 0.83
HOXA2O43364 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HOXA2O43364 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HOXA2O43364 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA2O43364 LINC01521-201ENST00000504184 1943 ntBASIC20.21■□□□□ 0.83
HOXA2O43364 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXA2O43364 TREX1-205ENST00000625293 1783 ntBASIC20.21■□□□□ 0.83
HOXA2O43364 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA2O43364 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.21■□□□□ 0.83
HOXA2O43364 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXA2O43364 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA2O43364 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HOXA2O43364 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.21■□□□□ 0.83
HOXA2O43364 CHCHD2P8-201ENST00000429873 447 ntBASIC20.21■□□□□ 0.83
HOXA2O43364 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA2O43364 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
HOXA2O43364 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.21■□□□□ 0.83
HOXA2O43364 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HOXA2O43364 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA2O43364 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms