Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.48■□□□□ 0.71
DFFAO00273 AP000525.1-201ENST00000608286 694 ntBASIC19.48■□□□□ 0.71
DFFAO00273 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DFFAO00273 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
DFFAO00273 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.48■□□□□ 0.71
DFFAO00273 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.48■□□□□ 0.71
DFFAO00273 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.48■□□□□ 0.71
DFFAO00273 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DFFAO00273 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
DFFAO00273 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DFFAO00273 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DFFAO00273 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
DFFAO00273 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DFFAO00273 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DFFAO00273 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DFFAO00273 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DFFAO00273 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DFFAO00273 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DFFAO00273 TSPY15P-201ENST00000457163 923 ntBASIC19.47■□□□□ 0.71
DFFAO00273 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.47■□□□□ 0.71
DFFAO00273 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.47■□□□□ 0.71
DFFAO00273 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.47■□□□□ 0.71
DFFAO00273 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.47■□□□□ 0.71
DFFAO00273 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.47■□□□□ 0.71
DFFAO00273 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.47■□□□□ 0.71
DFFAO00273 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
DFFAO00273 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DFFAO00273 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DFFAO00273 HCG11-201ENST00000411553 5696 ntBASIC19.47■□□□□ 0.71
DFFAO00273 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DFFAO00273 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DFFAO00273 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DFFAO00273 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.47■□□□□ 0.71
DFFAO00273 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.46■□□□□ 0.71
DFFAO00273 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 AC020763.4-201ENST00000623414 4170 ntBASIC19.46■□□□□ 0.71
DFFAO00273 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.46■□□□□ 0.71
DFFAO00273 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DFFAO00273 AL390955.1-201ENST00000428694 934 ntBASIC19.46■□□□□ 0.71
DFFAO00273 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.46■□□□□ 0.71
DFFAO00273 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.46■□□□□ 0.71
DFFAO00273 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.46■□□□□ 0.71
DFFAO00273 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
DFFAO00273 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
DFFAO00273 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DFFAO00273 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.46■□□□□ 0.71
DFFAO00273 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.46■□□□□ 0.71
DFFAO00273 AC079598.2-202ENST00000546624 1451 ntBASIC19.46■□□□□ 0.71
DFFAO00273 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.46■□□□□ 0.71
DFFAO00273 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DFFAO00273 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 AC096733.2-201ENST00000609937 1394 ntBASIC19.45■□□□□ 0.7
DFFAO00273 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.45■□□□□ 0.7
DFFAO00273 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
DFFAO00273 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.45■□□□□ 0.7
DFFAO00273 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
DFFAO00273 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.45■□□□□ 0.7
DFFAO00273 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.45■□□□□ 0.7
DFFAO00273 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
DFFAO00273 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DFFAO00273 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
DFFAO00273 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DFFAO00273 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
DFFAO00273 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
DFFAO00273 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.44■□□□□ 0.7
DFFAO00273 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
DFFAO00273 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.44■□□□□ 0.7
DFFAO00273 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.44■□□□□ 0.7
DFFAO00273 MIR1238-201ENST00000408483 83 ntBASIC19.44■□□□□ 0.7
DFFAO00273 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.44■□□□□ 0.7
DFFAO00273 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.44■□□□□ 0.7
DFFAO00273 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms