Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.43■□□□□ 0.86
LRRC53A6NM62 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 Z85996.1-201ENST00000494644 937 ntBASIC20.43■□□□□ 0.86
LRRC53A6NM62 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LRRC53A6NM62 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC53A6NM62 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC53A6NM62 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC53A6NM62 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
LRRC53A6NM62 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC53A6NM62 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC53A6NM62 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LRRC53A6NM62 AL354751.1-201ENST00000412768 1863 ntBASIC20.42■□□□□ 0.86
LRRC53A6NM62 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC53A6NM62 KRASP1-201ENST00000407852 552 ntBASIC20.42■□□□□ 0.86
LRRC53A6NM62 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC53A6NM62 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC53A6NM62 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC53A6NM62 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LRRC53A6NM62 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC53A6NM62 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC53A6NM62 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC53A6NM62 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 AC018470.1-201ENST00000624790 3129 ntBASIC20.41■□□□□ 0.86
LRRC53A6NM62 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 AC126763.1-201ENST00000552015 2118 ntBASIC20.41■□□□□ 0.86
LRRC53A6NM62 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LRRC53A6NM62 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC53A6NM62 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 AC239809.2-201ENST00000415381 517 ntBASIC20.4■□□□□ 0.86
LRRC53A6NM62 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LRRC53A6NM62 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC53A6NM62 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LRRC53A6NM62 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC53A6NM62 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRC53A6NM62 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms