Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.46■□□□□ 0.87
CCDC66A2RUB6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 AL050303.2-201ENST00000619798 666 ntBASIC20.46■□□□□ 0.87
CCDC66A2RUB6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC66A2RUB6 PKD1P1-201ENST00000458669 6805 ntBASIC20.45■□□□□ 0.86
CCDC66A2RUB6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC66A2RUB6 CROCCP3-202ENST00000420820 1947 ntBASIC20.45■□□□□ 0.86
CCDC66A2RUB6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 AC005829.2-201ENST00000571422 1056 ntBASIC20.44■□□□□ 0.86
CCDC66A2RUB6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC66A2RUB6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 CDCA4P2-201ENST00000441182 718 ntBASIC20.43■□□□□ 0.86
CCDC66A2RUB6 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms