Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 MIR4651-201ENST00000582622 73 ntBASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC073195.1-201ENST00000607241 877 ntBASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 FAM197Y4-202ENST00000622692 608 ntBASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 KRT18P29-201ENST00000397031 1267 ntBASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC004951.3-201ENST00000418645 1148 ntBASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 ITM2C-210ENST00000620962 501 ntBASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 AL512353.2-201ENST00000448759 1962 ntBASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-4A0A1B0GX49 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 RPS2P4-201ENST00000476944 856 ntBASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 AF186192.3-201ENST00000583427 947 ntBASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 KRT8P11-201ENST00000409686 1436 ntBASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-4A0A1B0GX49 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms