Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV5-4A0A0C4DH59 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV5-4A0A0C4DH59 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 GPAT2P1-201ENST00000444924 1672 ntBASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 Z98044.1-201ENST00000632503 1764 ntBASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 CCR12P-201ENST00000446203 998 ntBASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV5-4A0A0C4DH59 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC007663.1-201ENST00000438948 1240 ntBASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 AP003041.3-201ENST00000527151 707 ntBASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 NAPSB-206ENST00000562112 1266 ntBASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC116562.4-202ENST00000641738 218 ntBASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV5-4A0A0C4DH59 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC010653.2-201ENST00000623505 997 ntBASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV5-4A0A0C4DH59 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 AL138781.2-201ENST00000617896 1843 ntBASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 INGX-201ENST00000359239 846 ntBASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC087499.1-201ENST00000418141 1075 ntBASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-4A0A0C4DH59 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms