Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 TSPY21P-201ENST00000433481 731 ntBASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 AC083906.6-201ENST00000641366 219 ntBASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 AC135050.7-201ENST00000624508 2218 ntBASIC14.09□□□□□ -0.15
TRAV21A0A0B4J279 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAV21A0A0B4J279 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 MYC-209ENST00000641252 345 ntBASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms