Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AC009113.1-201ENST00000570267 2443 ntBASIC16.74■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AC012618.2-201ENST00000428058 849 ntBASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 CKBP1-201ENST00000565489 1086 ntBASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 TMEM191A-211ENST00000637163 1067 ntBASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AL049637.2-201ENST00000641778 930 ntBASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ANO7L1-203ENST00000602586 1720 ntBASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 NUDT16P1-203ENST00000513809 620 ntBASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AP000692.2-201ENST00000608391 879 ntBASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 FSCN1P1-201ENST00000568912 1481 ntBASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV1D-43A0A0B4J1Z2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms