Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
GPC6Q9Y625 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
GPC6Q9Y625 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
GPC6Q9Y625 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
GPC6Q9Y625 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GPC6Q9Y625 MIR450A1-201ENST00000362262 91 ntBASIC3.69□□□□□ -1.82
GPC6Q9Y625 Y_RNA.280-201ENST00000364765 112 ntBASIC3.69□□□□□ -1.82
GPC6Q9Y625 SNORA11-201ENST00000408789 128 ntBASIC3.69□□□□□ -1.82
GPC6Q9Y625 Y_RNA.621-201ENST00000411065 96 ntBASIC3.69□□□□□ -1.82
GPC6Q9Y625 SNORA72.7-201ENST00000516349 94 ntBASIC3.69□□□□□ -1.82
GPC6Q9Y625 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.69□□□□□ -1.82
GPC6Q9Y625 PARP1P2-201ENST00000556806 195 ntBASIC3.69□□□□□ -1.82
GPC6Q9Y625 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.69□□□□□ -1.82
GPC6Q9Y625 MIR3117-201ENST00000584034 78 ntBASIC3.69□□□□□ -1.82
GPC6Q9Y625 AC093732.2-201ENST00000607950 274 ntBASIC3.69□□□□□ -1.82
GPC6Q9Y625 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GPC6Q9Y625 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.69□□□□□ -1.82
GPC6Q9Y625 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
GPC6Q9Y625 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
GPC6Q9Y625 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
GPC6Q9Y625 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
GPC6Q9Y625 RNU6-743P-201ENST00000364151 106 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 RNU6-647P-201ENST00000364243 107 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
GPC6Q9Y625 AP000567.1-201ENST00000406413 156 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.68□□□□□ -1.82
GPC6Q9Y625 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.68□□□□□ -1.82
GPC6Q9Y625 AC008134.1-201ENST00000420943 193 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 RPL39P40-201ENST00000445481 146 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 RPS4XP11-201ENST00000446897 772 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 AL500522.2-201ENST00000448562 343 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 Y_RNA.649-201ENST00000459077 103 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 RPS26P45-201ENST00000471748 340 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 RPS29P21-201ENST00000496272 170 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 PHBP14-201ENST00000512887 367 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 SNORD77.4-201ENST00000516158 81 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 RNA5SP153-201ENST00000516498 76 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 RNU1-104P-201ENST00000517280 175 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.68□□□□□ -1.82
GPC6Q9Y625 MIR2681-201ENST00000581814 105 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 MIR4438-201ENST00000585271 93 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 MIR6868-201ENST00000611215 58 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.68□□□□□ -1.82
GPC6Q9Y625 Pinc.1-201ENST00000616452 154 ntBASIC3.68□□□□□ -1.82
GPC6Q9Y625 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GPC6Q9Y625 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.68□□□□□ -1.82
GPC6Q9Y625 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GPC6Q9Y625 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GPC6Q9Y625 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
GPC6Q9Y625 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
GPC6Q9Y625 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GPC6Q9Y625 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GPC6Q9Y625 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
GPC6Q9Y625 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.67□□□□□ -1.82
GPC6Q9Y625 RNA5SP399-201ENST00000364003 117 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 RNU6-1240P-201ENST00000365155 104 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 RNU6-117P-201ENST00000365415 107 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 AL603914.1-201ENST00000401964 204 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 AC016909.1-201ENST00000415916 166 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.67□□□□□ -1.82
GPC6Q9Y625 AC002075.2-201ENST00000425207 252 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 AC009414.1-201ENST00000427200 443 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 AC006445.1-201ENST00000491925 405 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 SNORA31.1-201ENST00000515993 133 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 SNORA31.5-201ENST00000516190 133 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 SCARNA17.1-201ENST00000516211 143 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 SCARNA17.2-201ENST00000516334 143 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 RNU6-586P-201ENST00000517265 104 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 RNU2-60P-201ENST00000517290 128 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.67□□□□□ -1.82
GPC6Q9Y625 AL160236.1-201ENST00000556317 195 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 JPX_2.1-201ENST00000614161 69 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 SCARNA17.4-201ENST00000614296 143 ntBASIC3.67□□□□□ -1.82
GPC6Q9Y625 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.67□□□□□ -1.82
GPC6Q9Y625 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.67□□□□□ -1.82
GPC6Q9Y625 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GPC6Q9Y625 MFSD8-236ENST00000641509 4050 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.66□□□□□ -1.82
GPC6Q9Y625 Y_RNA.111-201ENST00000363248 100 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 RNU6-1209P-201ENST00000363655 107 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 RNU6-1164P-201ENST00000364428 107 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 RNA5SP130-201ENST00000364431 114 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 Y_RNA.309-201ENST00000365046 111 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 AL356095.1-201ENST00000417217 199 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 RPL30P4-201ENST00000429309 333 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.66□□□□□ -1.82
GPC6Q9Y625 U3.44-201ENST00000458938 192 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 Y_RNA.651-201ENST00000459380 103 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 RPL27AP5-201ENST00000469428 449 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 RNU7-149P-201ENST00000516739 59 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 RNU7-172P-201ENST00000517125 64 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 MIR2116-201ENST00000517221 80 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 AC011604.1-201ENST00000545978 196 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 AL022345.2-201ENST00000606307 135 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 AC004832.5-201ENST00000608677 401 ntBASIC3.66□□□□□ -1.82
GPC6Q9Y625 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
GPC6Q9Y625 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.82
GPC6Q9Y625 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
GPC6Q9Y625 RNA5SP295-201ENST00000362655 121 ntBASIC3.65□□□□□ -1.83
GPC6Q9Y625 Y_RNA.52-201ENST00000362760 96 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms