RNA–Protein interactions for RNA: ENST00000517290.1

RNU2-60P-201, Transcript of RNA, U2 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU2-60P, Length 128 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-60P-201ENST00000517290 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
RNU2-60P-201ENST00000517290 CHIC1Q5VXU3 224 aa13.93□□□□□ -0.18
RNU2-60P-201ENST00000517290 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
RNU2-60P-201ENST00000517290 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
RNU2-60P-201ENST00000517290 POTEDQ86YR6 584 aa12.29□□□□□ -0.44
RNU2-60P-201ENST00000517290 FOXD1Q16676 465 aa12.07□□□□□ -0.48
RNU2-60P-201ENST00000517290 MSH5O43196 834 aa11.49□□□□□ -0.57
RNU2-60P-201ENST00000517290 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
RNU2-60P-201ENST00000517290 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
RNU2-60P-201ENST00000517290 ADRA2BP18089 450 aa10.73□□□□□ -0.69
RNU2-60P-201ENST00000517290 PLPPR3Q6T4P5 718 aa10.58□□□□□ -0.72
RNU2-60P-201ENST00000517290 CACNB1Q02641 598 aaPredicted RBP10.23□□□□□ -0.77
RNU2-60P-201ENST00000517290 DMRT2Q9Y5R5 561 aa10.09□□□□□ -0.79
RNU2-60P-201ENST00000517290 MAPK8IP2Q13387 824 aaPredicted RBP10.07□□□□□ -0.8
RNU2-60P-201ENST00000517290 SCAF1Q9H7N4 1312 aaKnown RBP9.79□□□□□ -0.84
RNU2-60P-201ENST00000517290 RNF39Q9H2S5 420 aa9.78□□□□□ -0.84
RNU2-60P-201ENST00000517290 DCAF8L1A6NGE4 600 aa9.66□□□□□ -0.86
RNU2-60P-201ENST00000517290 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
RNU2-60P-201ENST00000517290 HOXD11P31277 338 aaPredicted RBP9.5□□□□□ -0.89
RNU2-60P-201ENST00000517290 POTEHQ6S545 545 aa9.49□□□□□ -0.89
RNU2-60P-201ENST00000517290 DNAJC5BQ9UF47 199 aa9.3□□□□□ -0.92
RNU2-60P-201ENST00000517290 RNF216Q9NWF9 866 aaPredicted RBP9.24□□□□□ -0.93
RNU2-60P-201ENST00000517290 PPP4R3CPQ6ZMV5 832 aa9.21□□□□□ -0.94
RNU2-60P-201ENST00000517290 CNKSR2Q8WXI2 1034 aa9.17□□□□□ -0.94
RNU2-60P-201ENST00000517290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9□□□□□ -0.97
RNU2-60P-201ENST00000517290 DSG3P32926 999 aa8.95□□□□□ -0.98
RNU2-60P-201ENST00000517290 SPINK5Q9NQ38 1064 aaPredicted RBP8.84□□□□□ -0.99
RNU2-60P-201ENST00000517290 CAPN15O75808 1086 aa8.81□□□□□ -1
RNU2-60P-201ENST00000517290 U3KPZ7 1027 aaPredicted RBP8.78□□□□□ -1
RNU2-60P-201ENST00000517290 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
RNU2-60P-201ENST00000517290 SP7Q8TDD2 431 aaPredicted RBP8.61□□□□□ -1.03
RNU2-60P-201ENST00000517290 CHRDL2Q6WN34 429 aa8.6□□□□□ -1.03
RNU2-60P-201ENST00000517290 ABCB7O75027 752 aa8.57□□□□□ -1.04
RNU2-60P-201ENST00000517290 NPM3O75607 178 aaKnown RBP8.55□□□□□ -1.04
RNU2-60P-201ENST00000517290 TRHP20396 242 aaPredicted RBP8.53□□□□□ -1.04
RNU2-60P-201ENST00000517290 RBM42Q9BTD8 480 aaKnown RBP8.51□□□□□ -1.05
RNU2-60P-201ENST00000517290 ZNF219Q9P2Y4 722 aaPredicted RBP8.49□□□□□ -1.05
RNU2-60P-201ENST00000517290 APLP2Q06481 763 aa8.41□□□□□ -1.06
RNU2-60P-201ENST00000517290 SLC4A2P04920 1241 aa8.35□□□□□ -1.07
RNU2-60P-201ENST00000517290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.27□□□□□ -1.09
RNU2-60P-201ENST00000517290 HNRNPUL2Q1KMD3 747 aaKnown RBP8.27□□□□□ -1.09
RNU2-60P-201ENST00000517290 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
RNU2-60P-201ENST00000517290 HAX1O00165 279 aa8.25□□□□□ -1.09
RNU2-60P-201ENST00000517290 SAMD1Q6SPF0 538 aaPredicted RBP8.21□□□□□ -1.1
RNU2-60P-201ENST00000517290 AKT1S1Q96B36 256 aa8.2□□□□□ -1.1
RNU2-60P-201ENST00000517290 POLA2Q14181 598 aa8.19□□□□□ -1.1
RNU2-60P-201ENST00000517290 EVX2Q03828 476 aa8.17□□□□□ -1.1
RNU2-60P-201ENST00000517290 REM2Q8IYK8 340 aaPredicted RBP8.14□□□□□ -1.11
RNU2-60P-201ENST00000517290 FXR2P51116 673 aaKnown RBP eCLIP8.13□□□□□ -1.11
RNU2-60P-201ENST00000517290 PITPNM1O00562 1244 aa8.06□□□□□ -1.12
RNU2-60P-201ENST00000517290 LHX8Q68G74 356 aa8.06□□□□□ -1.12
RNU2-60P-201ENST00000517290 PLSCR2Q9NRY7 297 aa8.04□□□□□ -1.12
RNU2-60P-201ENST00000517290 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
RNU2-60P-201ENST00000517290 ZBTB12Q9Y330 459 aaPredicted RBP7.93□□□□□ -1.14
RNU2-60P-201ENST00000517290 GABBR2O75899 941 aa7.92□□□□□ -1.14
RNU2-60P-201ENST00000517290 C19orf67A6NJJ6 358 aa7.89□□□□□ -1.15
RNU2-60P-201ENST00000517290 MYCNP04198 464 aaPredicted RBP7.89□□□□□ -1.15
RNU2-60P-201ENST00000517290 KCNA4P22459 653 aa7.84□□□□□ -1.15
RNU2-60P-201ENST00000517290 PRKAR2AP13861 404 aaKnown RBP7.83□□□□□ -1.16
RNU2-60P-201ENST00000517290 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
RNU2-60P-201ENST00000517290 POTEIP0CG38 1075 aa7.77□□□□□ -1.17
RNU2-60P-201ENST00000517290 CLEC11AQ9Y240 323 aa7.68□□□□□ -1.18
RNU2-60P-201ENST00000517290 SPDYE2BA6NHP3 402 aa7.66□□□□□ -1.18
RNU2-60P-201ENST00000517290 SPDYE6P0CI01 402 aa7.66□□□□□ -1.18
RNU2-60P-201ENST00000517290 SPDYE2Q495Y8 402 aa7.66□□□□□ -1.18
RNU2-60P-201ENST00000517290 SPDYE1Q8NFV5 336 aaPredicted RBP7.66□□□□□ -1.18
RNU2-60P-201ENST00000517290 CHADLQ6NUI6 762 aa7.63□□□□□ -1.19
RNU2-60P-201ENST00000517290 POTEMA6NI47 508 aa7.62□□□□□ -1.19
RNU2-60P-201ENST00000517290 OTUD5Q96G74 571 aa7.59□□□□□ -1.19
RNU2-60P-201ENST00000517290 POTEGQ6S5H5 508 aa7.58□□□□□ -1.2
RNU2-60P-201ENST00000517290 CLCN6P51797 869 aa7.56□□□□□ -1.2
RNU2-60P-201ENST00000517290 CD44P16070 742 aaKnown RBP7.54□□□□□ -1.2
RNU2-60P-201ENST00000517290 DCBLD2Q96PD2 775 aa7.54□□□□□ -1.2
RNU2-60P-201ENST00000517290 PCDH10Q9P2E7 1040 aa7.52□□□□□ -1.21
RNU2-60P-201ENST00000517290 SSUH2Q9Y2M2 353 aa7.52□□□□□ -1.21
RNU2-60P-201ENST00000517290 POTEB2H3BUK9 544 aa7.51□□□□□ -1.21
RNU2-60P-201ENST00000517290 FOXD4L1Q9NU39 408 aa7.49□□□□□ -1.21
RNU2-60P-201ENST00000517290 PRR29P0C7W0 189 aa7.47□□□□□ -1.21
RNU2-60P-201ENST00000517290 FBLN2P98095 1184 aa7.47□□□□□ -1.21
RNU2-60P-201ENST00000517290 ZNF692Q9BU19 519 aaPredicted RBP7.47□□□□□ -1.21
RNU2-60P-201ENST00000517290 FARP1Q9Y4F1 1045 aaPredicted RBP7.45□□□□□ -1.22
RNU2-60P-201ENST00000517290 MKRN4PQ13434 485 aaPredicted RBP7.41□□□□□ -1.22
RNU2-60P-201ENST00000517290 ZNF579Q8NAF0 562 aaKnown RBP7.41□□□□□ -1.22
RNU2-60P-201ENST00000517290 GALR2O43603 387 aaPredicted RBP7.37□□□□□ -1.23
RNU2-60P-201ENST00000517290 LCE2DQ5TA82 110 aaPredicted RBP7.37□□□□□ -1.23
RNU2-60P-201ENST00000517290 PABPN1Q86U42 306 aaKnown RBP eCLIP7.34□□□□□ -1.23
RNU2-60P-201ENST00000517290 ZRANB1Q9UGI0 708 aa7.34□□□□□ -1.23
RNU2-60P-201ENST00000517290 ATXN8OSP0DMR3 200 aa7.33□□□□□ -1.24
RNU2-60P-201ENST00000517290 POTEJP0CG39 1038 aa7.31□□□□□ -1.24
RNU2-60P-201ENST00000517290 PELP1Q8IZL8 1130 aaKnown RBP7.31□□□□□ -1.24
RNU2-60P-201ENST00000517290 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
RNU2-60P-201ENST00000517290 SLC4A1APQ9BWU0 796 aaKnown RBP7.26□□□□□ -1.25
RNU2-60P-201ENST00000517290 ZBTB22O15209 634 aa7.23□□□□□ -1.25
RNU2-60P-201ENST00000517290 MAMSTRQ6ZN01 415 aa7.22□□□□□ -1.25
RNU2-60P-201ENST00000517290 METRNQ9UJH8 293 aa7.22□□□□□ -1.25
RNU2-60P-201ENST00000517290 PHF12Q96QT6 1004 aa7.2□□□□□ -1.26
RNU2-60P-201ENST00000517290 ASTLQ6HA08 431 aaPredicted RBP7.19□□□□□ -1.26
RNU2-60P-201ENST00000517290 C7P10643 843 aa7.18□□□□□ -1.26
RNU2-60P-201ENST00000517290 CDAN1Q8IWY9 1227 aa7.18□□□□□ -1.26
RNU2-60P-201ENST00000517290 CREBZFQ9NS37 354 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms