Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RNU7-115P-201ENST00000516433 55 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 AC109810.1-201ENST00000534066 224 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 AC068700.1-201ENST00000565862 3754 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 MIR449A-201ENST00000362113 91 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 RNA5SP104-201ENST00000410989 118 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 AL162725.1-201ENST00000435405 301 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 AC016717.1-201ENST00000448918 286 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 AC016925.1-201ENST00000458303 298 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 SNORD116-25-201ENST00000516517 92 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 AC015813.4-201ENST00000610469 179 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 MIR5739-201ENST00000619803 80 ntBASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXXC1Q9P0U4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 U8.7-201ENST00000364940 136 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 RNU6-1117P-201ENST00000384525 104 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 Y_RNA.572-201ENST00000384757 98 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 AC245047.8-201ENST00000456455 284 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 RNU6-498P-201ENST00000459468 107 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 TRBV12-2-201ENST00000489763 344 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 AC117454.1-201ENST00000491120 168 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 MIR4644-201ENST00000579929 84 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 AC110741.2-201ENST00000605278 268 ntBASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXXC1Q9P0U4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 RNU6-546P-201ENST00000383991 107 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 Y_RNA.568-201ENST00000384742 113 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 SNORA36B-201ENST00000410438 131 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 AC025750.2-201ENST00000442609 450 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 AL121914.1-201ENST00000450188 156 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 CYP2C59P-201ENST00000457790 269 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 RPL36AP21-201ENST00000490372 323 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 RNA5SP20-201ENST00000515976 84 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 RNU2-34P-201ENST00000516534 121 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 RNU6-965P-201ENST00000516721 96 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 RNU7-116P-201ENST00000516940 62 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 AC090616.3-201ENST00000582184 217 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 AC006435.5-201ENST00000624486 112 ntBASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXXC1Q9P0U4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 Y_RNA.229-201ENST00000364347 113 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 RNU6-1228P-201ENST00000391014 107 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 FO393413.1-201ENST00000402892 195 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 RPS29P12-201ENST00000460178 152 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 AC010409.1-201ENST00000487382 476 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 RNU7-121P-201ENST00000516604 62 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 RNU6-453P-201ENST00000516819 85 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 AC027419.1-201ENST00000522976 328 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 AP003355.3-201ENST00000623465 114 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
CXXC1Q9P0U4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
CXXC1Q9P0U4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXXC1Q9P0U4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.76□□□□□ -1.81
CXXC1Q9P0U4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms